Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01340 and BPUM_0657

See DNA alignment / Visit BSNT_01340 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_01340___yfjN.1.24716.seq
#    -bsequence pep-align/BPUM_0657___yfjN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01340___yfjN-BPUM_0657___yfjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01340___yfjN-BPUM_0657___yfjN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01340___yfjN
# 2: BPUM_0657___yfjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     271/332 (81.6%)
# Similarity:   296/332 (89.2%)
# Gaps:           8/332 ( 2.4%)
# Score: 1444.0
# 
#
#=======================================

BSNT_01340___      1 MKGFECIMTDNFWRELPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTE     50
                            |:.||||:||||||:|||||:|||||||||||||.||||||||
BPUM_0657___y      1 -------MSKNFWRDLPRPFFILAPMEEVTDVVFRHVVSEAARPDVFFTE     43

BSNT_01340___     51 FTNSESYCHPDGKDSVRGRLTFTEDEQPMVAHIWGDKPENFRKMSIGMAE    100
                     ||||||||||||..||:|||||||||||:|||||||||||||:|||||||
BPUM_0657___y     44 FTNSESYCHPDGIQSVKGRLTFTEDEQPIVAHIWGDKPENFRQMSIGMAE     93

BSNT_01340___    101 LGFKGLDINMGCPVPNVAGNGKGSGLICRPAVAAELIQAAKAGGLPVSVK    150
                     |||:|||||||||||||..||||||||.||.|||||||||||||||||||
BPUM_0657___y     94 LGFQGLDINMGCPVPNVTQNGKGSGLILRPDVAAELIQAAKAGGLPVSVK    143

BSNT_01340___    151 TRLGYTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIK    200
                     ||||:|:||||.:||.|||:|||.|||||||||.|||:|||||||||||.
BPUM_0657___y    144 TRLGFTEVDEWHDWLRHILEQDIVNLSIHLRTRKEMSQVDAHWELIPEII    193

BSNT_01340___    201 KLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFE    250
                     |||||||||||||||||||||||||||||||||||:|||||||.||||||
BPUM_0657___y    194 KLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGVMIGRGIFHNPFAFE    243

BSNT_01340___    251 KEPKEHSSKELLDLLRLHLDLHEKYSALEARPYKPLPRFFKIYLRGFRGA    300
                     ||||||:|.|||.|||||||||::||:|..||:|.|.||||||::|||||
BPUM_0657___y    244 KEPKEHTSDELLGLLRLHLDLHDQYSSLGLRPFKALHRFFKIYVKGFRGA    293

BSNT_01340___    301 SELRNQCMNTKSTDEVRALLDDFERKYLDGVE    332
                     |.||||.|||.|||||||:||:||.:..:.. 
BPUM_0657___y    294 SFLRNQLMNTSSTDEVRAMLDEFEARNQEQS-    324


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.