Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01340 and BPUM_0657
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence pep-align/BSNT_01340___yfjN.1.24716.seq
# -bsequence pep-align/BPUM_0657___yfjN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01340___yfjN-BPUM_0657___yfjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01340___yfjN-BPUM_0657___yfjN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01340___yfjN
# 2: BPUM_0657___yfjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity: 271/332 (81.6%)
# Similarity: 296/332 (89.2%)
# Gaps: 8/332 ( 2.4%)
# Score: 1444.0
#
#
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BSNT_01340___ 1 MKGFECIMTDNFWRELPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTE 50
|:.||||:||||||:|||||:|||||||||||||.||||||||
BPUM_0657___y 1 -------MSKNFWRDLPRPFFILAPMEEVTDVVFRHVVSEAARPDVFFTE 43
BSNT_01340___ 51 FTNSESYCHPDGKDSVRGRLTFTEDEQPMVAHIWGDKPENFRKMSIGMAE 100
||||||||||||..||:|||||||||||:|||||||||||||:|||||||
BPUM_0657___y 44 FTNSESYCHPDGIQSVKGRLTFTEDEQPIVAHIWGDKPENFRQMSIGMAE 93
BSNT_01340___ 101 LGFKGLDINMGCPVPNVAGNGKGSGLICRPAVAAELIQAAKAGGLPVSVK 150
|||:|||||||||||||..||||||||.||.|||||||||||||||||||
BPUM_0657___y 94 LGFQGLDINMGCPVPNVTQNGKGSGLILRPDVAAELIQAAKAGGLPVSVK 143
BSNT_01340___ 151 TRLGYTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIK 200
||||:|:||||.:||.|||:|||.|||||||||.|||:|||||||||||.
BPUM_0657___y 144 TRLGFTEVDEWHDWLRHILEQDIVNLSIHLRTRKEMSQVDAHWELIPEII 193
BSNT_01340___ 201 KLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFE 250
|||||||||||||||||||||||||||||||||||:|||||||.||||||
BPUM_0657___y 194 KLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGVMIGRGIFHNPFAFE 243
BSNT_01340___ 251 KEPKEHSSKELLDLLRLHLDLHEKYSALEARPYKPLPRFFKIYLRGFRGA 300
||||||:|.|||.|||||||||::||:|..||:|.|.||||||::|||||
BPUM_0657___y 244 KEPKEHTSDELLGLLRLHLDLHDQYSSLGLRPFKALHRFFKIYVKGFRGA 293
BSNT_01340___ 301 SELRNQCMNTKSTDEVRALLDDFERKYLDGVE 332
|.||||.|||.|||||||:||:||.:..:..
BPUM_0657___y 294 SFLRNQLMNTSSTDEVRAMLDEFEARNQEQS- 324
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