Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01149 and BPUM_0647

See DNA alignment / Visit BSNT_01149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_01149___yerO.1.24716.seq
#    -bsequence pep-align/BPUM_0647___yerO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01149___yerO-BPUM_0647___yerO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01149___yerO-BPUM_0647___yerO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01149___yerO
# 2: BPUM_0647___yerO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     139/282 (49.3%)
# Similarity:   200/282 (70.9%)
# Gaps:           1/282 ( 0.4%)
# Score: 712.0
# 
#
#=======================================

BSNT_01149___      1 MNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEAL     50
                     ||||||:||||||:|||||||::|||||||.|||||||||||||||||.|
BPUM_0647___y      1 MNEKKEKIIKTSIQLFAKKGFSSTTIQEIADECGISKGAFYLHFKSKEQL     50

BSNT_01149___     51 LLSACEYYIGMSMNKMKNIEEDLAGKPPKEVLKKQIGAQFEDFRDHKDFI    100
                     ...|.||||..||..::.|.::.....|:|:.:|||..||:.|.::||||
BPUM_0647___y     51 FNRAFEYYIDTSMQSIETIRKENQHLAPREIFQKQIAEQFQHFAENKDFI    100

BSNT_01149___    101 VLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLS    150
                     :|:|:||||||||:||:|...|..:.::..:.::|.:||:.||.|:.|||
BPUM_0647___y    101 ILILSENIIPENQQIKKYSKTVKKQMNEEIQISILTTYGQEIEPYITDLS    150

BSNT_01149___    151 IMARGIVHSYMNVMVFNDELNIDAEEISAFIIERLDDLVQGLSRSALNPI    200
                     :|.:||:.||:.|::..|::.:..:|:|:||:||.||||||:.||...||
BPUM_0647___y    151 VMIQGIIQSYVQVLLLQDQMQLSFDELSSFILERFDDLVQGMLRSQTKPI    200

BSNT_01149___    201 VSKDIFNPMPAEKDQLLEDIQKVKENSTLPEDITVSLDVIEEELTQDKPR    250
                     :...|::........|.|:::.:|....|.:|..||::||||||.:.:||
BPUM_0647___y    201 LKPTIWDDDAPSATSLQEELRLLKLEHLLSDDTLVSIEVIEEELAKAEPR    250

BSNT_01149___    251 KPIIKGMLSNLTGTNDKEVERLRALISVFISI    282
                     ||:|:|||:||....|..|.|:...:.:|:| 
BPUM_0647___y    251 KPVIQGMLTNLEKCEDPAVIRVVEQLKLFLS-    281


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