Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02742 and BPUM_0630

See DNA alignment / Visit BSNT_02742 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_02742___pbpX.1.24716.seq
#    -bsequence pep-align/BPUM_0630___pbpX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02742___pbpX-BPUM_0630___pbpX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02742___pbpX-BPUM_0630___pbpX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: BPUM_0630___pbpX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 573
# Identity:     118/573 (20.6%)
# Similarity:   185/573 (32.3%)
# Gaps:         242/573 (42.2%)
# Score: 311.5
# 
#
#=======================================

BSNT_02742___      1 MTSPTRRRTAKHRRRKLNKRGKLLLGLLAVMVCITIWNALHRNSEENEPS     50
                                   .:.|:|...|..|||:     :|             
BPUM_0630___p      1 --------------MRKNQRVIYLSFLLAI-----LW-------------     18

BSNT_02742___     51 QETAAVSNTDQKKEVKKKTAKKSEEQIKTVDRNQKISNYLEEIGFSG-TA     99
                          :|:...:...|:..:.|:.:|:        |...:|.....| :.
BPUM_0630___p     19 -----ISSFVGEIYAKEVISPKAIDQV--------IEEQMELGRIPGMSV     55

BSNT_02742___    100 MIVRNGEIVTNKGFGYADRKHYIQNNPLTSFYVGSSQKALIATAILQLEE    149
                     :||:..|:|..|||||||||...|....|.|.:||:.||..|.||::||:
BPUM_0630___p     56 VIVKKDEVVYQKGFGYADRKKKKQVTASTFFEIGSTSKAFTALAIVELEK    105

BSNT_02742___    150 KGKLQTSDPVSTYLP-HFP--NG--QTITLKNLLTHTSGINGHIEGDGAI    194
                     :|||...||||:|:| .||  ||  |.:|::.|:.|||||  ..:....|
BPUM_0630___p    106 QGKLHVKDPVSSYIPGFFPTYNGKPQRLTVEQLMHHTSGI--PFQSIALI    153

BSNT_02742___    195 TPD----------DLIKDIELQGIKRQPG-VWDYQDSNYSVLAYIIAEVS    233
                     .||          |.:|.|||   .|:|| .::|...||.||..||..|:
BPUM_0630___p    154 QPDMTKDALKKTVDQLKSIEL---NRKPGSSFEYATINYDVLGLIIEHVT    200

BSNT_02742___    234 GEPYEQYIKNHIFK--PAGMTHAGFYKTYEKEPYPAVGYKMKGGKTVTPY    281
                     |..||.|:|. :||  ....|.||..:.  |....:.|:|:   :.:.|:
BPUM_0630___p    201 GTSYEAYMKK-LFKRHHLDQTEAGPKRI--KSGSVSEGFKL---QFLAPH    244

BSNT_02742___    282 IPDLSQLYG---AGDIYMSAIDMYKFDQALIDGKLYSQ------------    316
                     ..:..:..|   ||.|.|::.|:..:.|..:....:|:            
BPUM_0630___p    245 AYEAPEYRGNTPAGYIVMNSQDVGTWLQYQLTDSTWSRFVINPDHLTVNV    294

BSNT_02742___    317 -------------------KSYEKMFTPGSSSTYGMGFYVDPGSYSNHGV    347
                                        |..:.:|..||:..|...|.:.|......||
BPUM_0630___p    295 PEEGKHVYYNAGWYIKKADKQVDSLFHAGSNPNYSSFFLIHPKEEIAIGV    344

BSNT_02742___    348 MPGFNILNSFSKSGQTIVILFSNIQNNAKLGQVNNKIYQLLNQE------    391
                     :...|    .|.:.||..::...|....:..:.:...:||::|.      
BPUM_0630___p    345 LANMN----SSHTEQTARLIAKTITGTNEEVESSMDPFQLIDQLSLGATC    390

BSNT_02742___    391 --------------------------------------------------    391
                                                                       
BPUM_0630___p    391 LFILLQIVSIVRFMKWKKRVKNGAFVRRDMSLGVWLKSSGWVLLLIGILL    440

BSNT_02742___    391 --------------------------------------------------    391
                                                                       
BPUM_0630___p    441 LPMIVAQLAFNGLPWKMTFVWGPSSLIELAIAYYLFFMWFCTIGFIKGFM    490

BSNT_02742___    391 -----------------------    391
                                            
BPUM_0630___p    491 VTSPAGKRGKKDDRQTDFGHSSL    513


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