Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02742 and BPUM_0630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence pep-align/BSNT_02742___pbpX.1.24716.seq
# -bsequence pep-align/BPUM_0630___pbpX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02742___pbpX-BPUM_0630___pbpX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02742___pbpX-BPUM_0630___pbpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: BPUM_0630___pbpX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 573
# Identity: 118/573 (20.6%)
# Similarity: 185/573 (32.3%)
# Gaps: 242/573 (42.2%)
# Score: 311.5
#
#
#=======================================
BSNT_02742___ 1 MTSPTRRRTAKHRRRKLNKRGKLLLGLLAVMVCITIWNALHRNSEENEPS 50
.:.|:|...|..|||: :|
BPUM_0630___p 1 --------------MRKNQRVIYLSFLLAI-----LW------------- 18
BSNT_02742___ 51 QETAAVSNTDQKKEVKKKTAKKSEEQIKTVDRNQKISNYLEEIGFSG-TA 99
:|:...:...|:..:.|:.:|: |...:|.....| :.
BPUM_0630___p 19 -----ISSFVGEIYAKEVISPKAIDQV--------IEEQMELGRIPGMSV 55
BSNT_02742___ 100 MIVRNGEIVTNKGFGYADRKHYIQNNPLTSFYVGSSQKALIATAILQLEE 149
:||:..|:|..|||||||||...|....|.|.:||:.||..|.||::||:
BPUM_0630___p 56 VIVKKDEVVYQKGFGYADRKKKKQVTASTFFEIGSTSKAFTALAIVELEK 105
BSNT_02742___ 150 KGKLQTSDPVSTYLP-HFP--NG--QTITLKNLLTHTSGINGHIEGDGAI 194
:|||...||||:|:| .|| || |.:|::.|:.||||| ..:....|
BPUM_0630___p 106 QGKLHVKDPVSSYIPGFFPTYNGKPQRLTVEQLMHHTSGI--PFQSIALI 153
BSNT_02742___ 195 TPD----------DLIKDIELQGIKRQPG-VWDYQDSNYSVLAYIIAEVS 233
.|| |.:|.||| .|:|| .::|...||.||..||..|:
BPUM_0630___p 154 QPDMTKDALKKTVDQLKSIEL---NRKPGSSFEYATINYDVLGLIIEHVT 200
BSNT_02742___ 234 GEPYEQYIKNHIFK--PAGMTHAGFYKTYEKEPYPAVGYKMKGGKTVTPY 281
|..||.|:|. :|| ....|.||..:. |....:.|:|: :.:.|:
BPUM_0630___p 201 GTSYEAYMKK-LFKRHHLDQTEAGPKRI--KSGSVSEGFKL---QFLAPH 244
BSNT_02742___ 282 IPDLSQLYG---AGDIYMSAIDMYKFDQALIDGKLYSQ------------ 316
..:..:..| ||.|.|::.|:..:.|..:....:|:
BPUM_0630___p 245 AYEAPEYRGNTPAGYIVMNSQDVGTWLQYQLTDSTWSRFVINPDHLTVNV 294
BSNT_02742___ 317 -------------------KSYEKMFTPGSSSTYGMGFYVDPGSYSNHGV 347
|..:.:|..||:..|...|.:.|......||
BPUM_0630___p 295 PEEGKHVYYNAGWYIKKADKQVDSLFHAGSNPNYSSFFLIHPKEEIAIGV 344
BSNT_02742___ 348 MPGFNILNSFSKSGQTIVILFSNIQNNAKLGQVNNKIYQLLNQE------ 391
:...| .|.:.||..::...|....:..:.:...:||::|.
BPUM_0630___p 345 LANMN----SSHTEQTARLIAKTITGTNEEVESSMDPFQLIDQLSLGATC 390
BSNT_02742___ 391 -------------------------------------------------- 391
BPUM_0630___p 391 LFILLQIVSIVRFMKWKKRVKNGAFVRRDMSLGVWLKSSGWVLLLIGILL 440
BSNT_02742___ 391 -------------------------------------------------- 391
BPUM_0630___p 441 LPMIVAQLAFNGLPWKMTFVWGPSSLIELAIAYYLFFMWFCTIGFIKGFM 490
BSNT_02742___ 391 ----------------------- 391
BPUM_0630___p 491 VTSPAGKRGKKDDRQTDFGHSSL 513
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