Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01135 and BPUM_0627
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence pep-align/BSNT_01135___yerH.1.24716.seq
# -bsequence pep-align/BPUM_0627___yerH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01135___yerH-BPUM_0627___yerH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01135___yerH-BPUM_0627___yerH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01135___yerH
# 2: BPUM_0627___yerH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 281/400 (70.2%)
# Similarity: 333/400 (83.2%)
# Gaps: 9/400 ( 2.2%)
# Score: 1452.0
#
#
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BSNT_01135___ 1 MKKTLALAATAAVLMLSACSSGFGGEKEEEITQKTAKSSEKAIVPKYNIS 50
||| |.|..|...|:||||:. |||:::||:||||.::.|.||:|.||||
BPUM_0627___y 1 MKK-LLLLLTMLTLVLSACAP-FGGKEDEEVTQKTDETKETAIIPMYNIS 48
BSNT_01135___ 51 DSYYKMVLPFKAGKARGLTTEQLNTRLDIDEFETGLMRLAQDSFSTDDYL 100
|||||||||||.|.|||||.|:||||||||||||||||||.:||:|:|||
BPUM_0627___y 49 DSYYKMVLPFKQGAARGLTAERLNTRLDIDEFETGLMRLATESFNTNDYL 98
BSNT_01135___ 101 FQEGQYLDEDTVLSWLARKKTGSDLKKAEKEDKNFKNEGLNPALPSSGST 150
|||||:|||||||.||||||||||||||||.||:|||.|||||||:||||
BPUM_0627___y 99 FQEGQHLDEDTVLGWLARKKTGSDLKKAEKADKDFKNLGLNPALPNSGST 148
BSNT_01135___ 151 EEKNESSPIYLASMLEHDYLVRKDKNSIQLGGVMIGLALNSVYYYREKTG 200
:.|||:|||||||||||:||:||||||:|||||:|||||||||||||..|
BPUM_0627___y 149 KSKNENSPIYLASMLEHNYLIRKDKNSLQLGGVVIGLALNSVYYYRENIG 198
BSNT_01135___ 201 DPQKEVEIKDS----TLRQQGEKIAQEVINRLRKKDNLKNVPITVALYKQ 246
|||:||.|..| .|..:|||||::||.|:|:.|.|:.||:.:|||||
BPUM_0627___y 199 DPQQEVTIDSSKNSKKLLSEGEKIAEQVIKRIRQMDGLQKVPVMIALYKQ 248
BSNT_01135___ 247 ASKTSIVPGNFIAKTEVKAGSTDISNWDDINEKYVFYPADTTTAEKYPDD 296
|.|:|||||||||||:|||||.||.|||.|.|:.||:|:|.... .|.||
BPUM_0627___y 249 APKSSIVPGNFIAKTDVKAGSADIGNWDTIKEENVFFPSDNAKG-NYKDD 297
BSNT_01135___ 297 TEVFKRFKNSIEEYFPNYTGVVGTALYENDEMKKMKIDIPMQFYGKSEVV 346
:|.|.|||..:|:||||||||||...|::..::|||::||||||||:|||
BPUM_0627___y 298 SERFDRFKTKVEDYFPNYTGVVGKGFYKDGNLQKMKVEIPMQFYGKTEVV 347
BSNT_01135___ 347 AFTQFLTGEVMDYYSKGSVDVEVNITSSDGQEAVIIRNAGDKEPTVHIYD 396
||||:|||||||||. |.::|:||||||.|||:|.:||.||||||||||
BPUM_0627___y 348 AFTQYLTGEVMDYYK--STNIEINITSSDQQEALITKNAEDKEPTVHIYD 395
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