Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01132 and BPUM_0625
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence pep-align/BSNT_01132___pcrA.1.24716.seq
# -bsequence pep-align/BPUM_0625___pcrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01132___pcrA-BPUM_0625___pcrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01132___pcrA-BPUM_0625___pcrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01132___pcrA
# 2: BPUM_0625___pcrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 614/742 (82.7%)
# Similarity: 676/742 (91.1%)
# Gaps: 5/742 ( 0.7%)
# Score: 3182.0
#
#
#=======================================
BSNT_01132___ 1 MNYISNQLLSGLNPVQQEAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMA 50
||.|||.||.|||..|:||||.||||||||||||||||||||||||||||
BPUM_0625___p 1 MNEISNHLLEGLNDAQKEAVKATDGPLLLMAGAGSGKTRVLTHRIAYLMA 50
BSNT_01132___ 51 EKHVAPWNILAITFTNKAAREMKERVESILGPGADDIWISTFHSMCVRIL 100
||||||||||||||||||||||:|||::||||||||||||||||||||||
BPUM_0625___p 51 EKHVAPWNILAITFTNKAAREMRERVQAILGPGADDIWISTFHSMCVRIL 100
BSNT_01132___ 101 RRDIDRIGINRNFSILDTGDQLSVIKGILKERNLDPKKFDPRSILGTISS 150
||||||||:|||||||||.|||||||.||||||:||||||||||||:|||
BPUM_0625___p 101 RRDIDRIGVNRNFSILDTSDQLSVIKNILKERNIDPKKFDPRSILGSISS 150
BSNT_01132___ 151 AKNELTEPEEFSKVAGGYYDQVVSDVYADYQKKLLKNQSLDFDDLIMTTI 200
|||||.:.||::|.||.:|||||||||.||||:||||||||||||||.||
BPUM_0625___p 151 AKNELIDAEEYAKTAGDFYDQVVSDVYTDYQKRLLKNQSLDFDDLIMMTI 200
BSNT_01132___ 201 KLFDRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKQLAERFQNLCVVG 250
:||:|:|||||.|||||||||||||||||||||||||.||:||||:||||
BPUM_0625___p 201 RLFERIPEVLEHYQRKFQYIHVDEYQDTNRAQYMLVKLLAQRFQNICVVG 250
BSNT_01132___ 251 DSDQSIYRWRGADITNILSFEKDYPNASVILLEQNYRSTKRILRAANEVI 300
|||||||||||||||||||||||||::.|||||||||||||||.|||.||
BPUM_0625___p 251 DSDQSIYRWRGADITNILSFEKDYPSSEVILLEQNYRSTKRILNAANTVI 300
BSNT_01132___ 301 KNNSNRKPKNLWTENDEGIKISYYRGDNEFGEGQFVAGKIHQLHSSGKRK 350
:|||||||||||||||||.||:|||.||||||||||||||||||.|||||
BPUM_0625___p 301 QNNSNRKPKNLWTENDEGAKIAYYRADNEFGEGQFVAGKIHQLHQSGKRK 350
BSNT_01132___ 351 LSDIAILYRTNAQSRVIEETLLKAGLNYNIVGGTKFYDRKEIKDILAYLR 400
|||.|||||||||||||||||||:.:.|||||||||||||||||||||||
BPUM_0625___p 351 LSDFAILYRTNAQSRVIEETLLKSNIQYNIVGGTKFYDRKEIKDILAYLR 400
BSNT_01132___ 401 LVSNPDDDISFTRIVNVPKRGVGATSLEKIASYAAINGLSFFQAIQQVDF 450
||:||||||||.|||||||||:||||::|||:||.:|.||.|:|:.||||
BPUM_0625___p 401 LVANPDDDISFARIVNVPKRGIGATSVDKIAAYAEMNDLSMFEALAQVDF 450
BSNT_01132___ 451 IGVSAKAANALDSFRQMIENLTNMQDYLSITELTEEILDKTEYREMLKAE 500
||:||:||||||.|:|:|:.:||||||||:||||||||:||.|||.||.|
BPUM_0625___p 451 IGLSARAANALDEFKQLIDQMTNMQDYLSVTELTEEILEKTGYREALKVE 500
BSNT_01132___ 501 KSIEAQSRLENIDEFLSVTKNFEQKSEDKTLVAFLTDLALIADIDQLDQQ 550
|:|||||||||||||||||||||:::|||:||.|||||||:||||:||:.
BPUM_0625___p 501 KTIEAQSRLENIDEFLSVTKNFEEQNEDKSLVTFLTDLALVADIDKLDEN 550
BSNT_01132___ 551 EEESGGKDAITLMTLHAAKGLEFPVVFLMGLEEGVFPHSRSLMEEAEMEE 600
|||. :||:.|||||||||||||||||||:|||||||||||||:|||||
BPUM_0625___p 551 EEED--QDAVILMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEDAEMEE 598
BSNT_01132___ 601 ERRLAYVGITRAEQELYLTNAKMRTLFGRTNMNPESRFIAEIPDDLLENL 650
|||||||||||||:||||::|||||||||||||.|||||.|||.|||:||
BPUM_0625___p 599 ERRLAYVGITRAEEELYLSSAKMRTLFGRTNMNLESRFIREIPADLLDNL 648
BSNT_01132___ 651 NEKKETRAT--SARKMQPRRGPVSRPVSYA-SKTGGDTLNWAVGDKAGHK 697
||||||:.. ..|:...||||||||.:.. ..|||.::.|||||||.||
BPUM_0625___p 649 NEKKETKTPFGQTRERPQRRGPVSRPQTQTIQNTGGGSIGWAVGDKAAHK 698
BSNT_01132___ 698 KWGTGTVVSVKGEGEGTELDIAFPSPVGVKRLLAAFAPIEKQ 739
|||.||||||||.|:.||||||||||.|:|||||||||||||
BPUM_0625___p 699 KWGVGTVVSVKGSGDSTELDIAFPSPTGIKRLLAAFAPIEKQ 740
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