Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01129 and BPUM_0621
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence pep-align/BSNT_01129___yerD.1.24716.seq
# -bsequence pep-align/BPUM_0621___yerD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01129___yerD-BPUM_0621___yerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01129___yerD-BPUM_0621___yerD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01129___yerD
# 2: BPUM_0621___yerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 526
# Identity: 366/526 (69.6%)
# Similarity: 446/526 (84.8%)
# Gaps: 1/526 ( 0.2%)
# Score: 2023.0
#
#
#=======================================
BSNT_01129___ 1 METIIIALIAFITGIIAIPIVLFAWIYIKDEKQQEHSILRNYPVIGRFRY 50
|.|..|.::|.:.....|||:||.||:::||||:|||:||||||||:.|:
BPUM_0621___y 1 MTTPFIVIVALLVIFFIIPIILFIWIWMRDEKQEEHSVLRNYPVIGKLRF 50
BSNT_01129___ 51 ILEKIGPELRQYLYSNDNEEQPFSRKEYEQTVISGKYKSRMMGFGSVRDF 100
|.|||||||||||:.||.||.||||:||||.|:|||||||.|||||.|||
BPUM_0621___y 51 IFEKIGPELRQYLFLNDREELPFSRREYEQAVMSGKYKSRTMGFGSKRDF 100
BSNT_01129___ 101 DKPGYYIRNAMFPKQREEMHVNQTPKIETQIYKMDADNLFKRKEHAEHIK 150
|||||||||.:|||||:|:.::|:.||:|::|::|.|||.:|.||.:.::
BPUM_0621___y 101 DKPGYYIRNVLFPKQRDELRIDQSEKIQTKVYQIDQDNLLRRSEHTKEVE 150
BSNT_01129___ 151 ADPYFLHPDDVQVIGEHTCEKPFYVKGLVGQSAMSYGSLGERAVTALSKG 200
|.||:||.|||||||||||:|||.||||:|||||||||||:||:||||.|
BPUM_0621___y 151 AKPYYLHQDDVQVIGEHTCQKPFRVKGLIGQSAMSYGSLGDRAITALSSG 200
BSNT_01129___ 201 LHQAGGTWMNTGEGGLSEYHLKGGADIICQIGPGLFGVRKRNGEFSWEEF 250
|..||||||||||||||.|||||||||||||||||||||..:|.||:|||
BPUM_0621___y 201 LKMAGGTWMNTGEGGLSPYHLKGGADIICQIGPGLFGVRTEDGAFSFEEF 250
BSNT_01129___ 251 KRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDS 300
|:||..:::|||||||||||||||||:||.||:||:|:||.:.|.:||||
BPUM_0621___y 251 KKKSEHEEVKAFELKLAQGAKTRGGHIDGEKVTEEIANIRKLPPHQSIDS 300
BSNT_01129___ 301 PNRFYEFSKPPEMLDFIEKLRDVGQKPVGIKLVAGHPEELHELFSHMQKS 350
||||..|...|:|.||||:||.:|.||||||||.||.|.:.||.::|:||
BPUM_0621___y 301 PNRFEMFHSIPDMFDFIEQLRSIGGKPVGIKLVVGHKENIEELAAYMKKS 350
BSNT_01129___ 351 GKHPDFITIDGSEGGTGASFYELADTVGLPIMTALPIVDTLLKQYGFRSQ 400
||||||||:||.||||||||:||||:.||||.||||:|..:||:||.|.|
BPUM_0621___y 351 GKHPDFITVDGGEGGTGASFHELADSAGLPIFTALPMVHQILKEYGVRDQ 400
BSNT_01129___ 401 LKIFASGKLLTPDKIAVALALGADFVNIARGMMFSVGCIRALVCHTNTCP 450
:|:|||||||:|||||:||::||||||||||:|||||||||.|||||.||
BPUM_0621___y 401 VKLFASGKLLSPDKIAIALSMGADFVNIARGLMFSVGCIRAQVCHTNKCP 450
BSNT_01129___ 451 AGVATTDPKLQKALSVEEKQHRVCNYVISLREGLFNLAAAAGINSPIHFS 500
.|||||||||||.||:|||::|||||::|||||||||:|||||.|||||:
BPUM_0621___y 451 VGVATTDPKLQKGLSIEEKKYRVCNYILSLREGLFNLSAAAGIESPIHFN 500
BSNT_01129___ 501 KEHVVYRKEDGSIIDIDNLIHQFVS- 525
::|:|||:|:|...::........|
BPUM_0621___y 501 EKHIVYRQENGQTSEVPIFSGTQPSV 526
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