Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01124 and BPUM_0617

See DNA alignment / Visit BSNT_01124 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:45
# Commandline: needle
#    -asequence pep-align/BSNT_01124___yerA.1.24716.seq
#    -bsequence pep-align/BPUM_0617___yerA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01124___yerA-BPUM_0617___yerA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01124___yerA-BPUM_0617___yerA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01124___yerA
# 2: BPUM_0617___yerA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     429/580 (74.0%)
# Similarity:   496/580 (85.5%)
# Gaps:           0/580 ( 0.0%)
# Score: 2323.0
# 
#
#=======================================

BSNT_01124___      1 MSERTFNWKNKDIRAQVDVVDSKLLPTLLLRNALVLNPYVKQWLKKNIWI     50
                     ||||||||:|.|||.|:||||||::|||||.|.|||||::|||:|.||||
BPUM_0617___y      1 MSERTFNWRNNDIRTQIDVVDSKIVPTLLLTNGLVLNPFLKQWVKANIWI     50

BSNT_01124___     51 YQDRIVYVGHELPNRAEEIHTIDCEGKYIVPGYIEPHAHPFQIYNPQTLA    100
                     :.|||||||.|||........||||||||||||||||||||.|||||:||
BPUM_0617___y     51 HDDRIVYVGAELPQNKSAKRVIDCEGKYIVPGYIEPHAHPFHIYNPQSLA    100

BSNT_01124___    101 EYVSQYGTTTFVNDNLFLLLQSGKKKALTILNELKKQPVQYFWWSRYDLQ    150
                     |||||:||||.|:|||||||||.:||||:.|.|||:||.|||||||||||
BPUM_0617___y    101 EYVSQFGTTTMVSDNLFLLLQSNEKKALSTLCELKQQPFQYFWWSRYDLQ    150

BSNT_01124___    151 TEVLNEDHVLPFDVRKQWIEHPDVIQGGEMTGWPRLVDGDDLMLHCMQAT    200
                     |||..||.:||.:.||:||:||||:||||:|.||||:|||||:|:|||.|
BPUM_0617___y    151 TEVRYEDEMLPINYRKEWIDHPDVLQGGELTSWPRLMDGDDLILYCMQET    200

BSNT_01124___    201 KKQRKRIEGHFPGASDKTLTKMKLFGADCDHEAMTGDEVMRRLELGYYVS    250
                     |||||||||||||||:||||||||||||.|||||..|:|::||.|||:||
BPUM_0617___y    201 KKQRKRIEGHFPGASEKTLTKMKLFGADSDHEAMNADDVLKRLSLGYHVS    250

BSNT_01124___    251 LRNSSIRPDVRKILQELHEKGFRYYDHFFYTTDGATPNFYKGGMTNELIR    300
                     ||:||||||:..||:||||:.||:|||||||||||.|:||:.||.|.||.
BPUM_0617___y    251 LRHSSIRPDLVNILRELHERDFRHYDHFFYTTDGAAPHFYEEGMINRLIA    300

BSNT_01124___    301 IALEEGVPAIDAYNMASFNIAKYYQMDDYLGVVGPGRLASLNILEAPLNP    350
                     ||||||||.|||||||:||||||||:||.|||||||||||||:|:.|:||
BPUM_0617___y    301 IALEEGVPIIDAYNMATFNIAKYYQIDDLLGVVGPGRLASLNVLDDPMNP    350

BSNT_01124___    351 NPVTVLSKGTILREDGCDLKAFTKTDWHKGGLVSLELSYDMTMDDLQFSM    400
                     ||.||:|||.||:.||.:...|.:|.|..||||.|:|.||:|..||||||
BPUM_0617___y    351 NPETVISKGVILKLDGENQHQFQETKWENGGLVPLDLGYDLTTSDLQFSM    400

BSNT_01124___    401 PMGVKMRNAVIMEPYMIEIDNSMEQLSFDHDESYLTMLDRHGKWRVNTMI    450
                     |:|||||||||||||.:|||||:.|||.|||:|:.:::||.|:||||||:
BPUM_0617___y    401 PLGVKMRNAVIMEPYTVEIDNSVNQLSCDHDQSFFSLIDRKGEWRVNTML    450

BSNT_01124___    451 KGFASSVQGFVSSFTTTGDIVAIGKNKADMLLAFARMKEIGGGIVLAENR    500
                     ||||:.||||||||:.||||:.|||||.||:||..|||||||||||.||.
BPUM_0617___y    451 KGFANKVQGFVSSFSLTGDILVIGKNKEDMMLAHKRMKEIGGGIVLTENG    500

BSNT_01124___    501 NILHEIPLALCGCASSEAYEDVLEKEQKLRDLLTERGYEFCDPIYTLLFL    550
                     .|||||||.|.||||:|.:|.||::.|.||:||.||||.|..||.||:|.
BPUM_0617___y    501 EILHEIPLQLSGCASAEPFETVLQQIQTLRELLIERGYPFDCPIDTLVFF    550

BSNT_01124___    551 QSTHLPYIRITPRGIFDVMKKTVLFPSIMR    580
                     |||||||||:||||||||||||||||||||
BPUM_0617___y    551 QSTHLPYIRVTPRGIFDVMKKTVLFPSIMR    580


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.