Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03219 and BPUM_0615

See DNA alignment / Visit BSNT_03219 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_03219___yodQ.1.24716.seq
#    -bsequence pep-align/BPUM_0615___yodQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03219___yodQ-BPUM_0615___yodQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03219___yodQ-BPUM_0615___yodQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03219___yodQ
# 2: BPUM_0615___yodQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity:     235/434 (54.1%)
# Similarity:   309/434 (71.2%)
# Gaps:          11/434 ( 2.5%)
# Score: 1270.5
# 
#
#=======================================

BSNT_03219___      1 MQDIERKVIEWLDQHSAKAIRLLKRLIGEKSTLGSEFNAQAVVLEKLRQF     50
                     ||.|.| :..|:.:|..:||.||::::..:||.|:|...|.:|..||...
BPUM_0615___y      1 MQPITR-IRSWMREHQDEAIALLQQMVQCESTQGNEQKVQQIVANKLSAI     49

BSNT_03219___     51 HMDIDVWEPSIKQLKQHPYFKSNRSDFHESPNIVAKKTGAGEGRSLILNG    100
                     ..|:||||...:.|.:||||.|.|..|..|||:..:..|.|:|:|::|||
BPUM_0615___y     50 GFDVDVWEIGGEDLLEHPYFYSPRRSFKGSPNVAGRLKGKGDGKSILLNG     99

BSNT_03219___    101 HIDVVPEGSVKDWKYEPYQAVEENGKIYGRGSTDMKGGNTALLFALEALH    150
                     |:||||.|..|.|.|.||.....||::||||:|||||||.:|||||||||
BPUM_0615___y    100 HVDVVPAGDTKQWTYPPYSGHIINGRLYGRGATDMKGGNVSLLFALEALH    149

BSNT_03219___    151 ACDVKLKGDVLFQSVVDEECGGAGTLSAIMRGYRADGALIPEPTNMKLFI    200
                     |..:.|||||:|.|||:||.||||||:||:|||.||.|:||||::||:|.
BPUM_0615___y    150 ALQIPLKGDVVFHSVVEEESGGAGTLAAILRGYTADAAIIPEPSHMKIFP    199

BSNT_03219___    201 KQQGSMWFRITVKGLSAHGGTRYEGVSAIEKSMHVITALQELEKVRNARI    250
                     .||||.|||:.:||.:|||||||.|||||||||.|::.:..||:.||.||
BPUM_0615___y    200 IQQGSKWFRLHIKGRAAHGGTRYHGVSAIEKSMVVLSHVAALEEERNQRI    249

BSNT_03219___    251 SDPLYDNIPIPVPVNIGTISGGAWPSSVADRVVIEGRCGIAPHEKTEAVK    300
                     ::||:.:||||:|:|||.|.||.|||||||.|.:|||.|:.|.|..|..:
BPUM_0615___y    250 TEPLFQHIPIPIPINIGKIQGGDWPSSVADLVTMEGRLGVMPGETVEQAE    299

BSNT_03219___    301 LELENWLKDLEYHDEWFKRHPVQVEWFGAQWLPNDLPDDHPLISVLQSAY    350
                     .|||||:..|...|||||.|||:||||||:|||..:..:|||:.:|:..|
BPUM_0615___y    300 KELENWMMGLGEKDEWFKEHPVEVEWFGARWLPGSIDTNHPLLGLLKEQY    349

BSNT_03219___    351 QKMKQTEPIIEASPWGTDGGLLYHAGDTPVIVFGPGETKTAHQANEYIEV    400
                     :.:|:..|.|||:|||||||||..|...|:||||||.|:.||..||.|::
BPUM_0615___y    350 EAVKKEPPKIEAAPWGTDGGLLSQAAGIPIIVFGPGTTELAHFPNESIDI    399

BSNT_03219___    401 EAMIESAKIIALFVMDWCGLHTDGEDADAQVNKE    434
                     |.:||:|:|||..:::||      |.|:|:    
BPUM_0615___y    400 EHVIEAAEIIAGTMVEWC------EAAEAE----    423


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