Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03219 and BPUM_0615
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_03219___yodQ.1.24716.seq
# -bsequence pep-align/BPUM_0615___yodQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03219___yodQ-BPUM_0615___yodQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03219___yodQ-BPUM_0615___yodQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03219___yodQ
# 2: BPUM_0615___yodQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 235/434 (54.1%)
# Similarity: 309/434 (71.2%)
# Gaps: 11/434 ( 2.5%)
# Score: 1270.5
#
#
#=======================================
BSNT_03219___ 1 MQDIERKVIEWLDQHSAKAIRLLKRLIGEKSTLGSEFNAQAVVLEKLRQF 50
||.|.| :..|:.:|..:||.||::::..:||.|:|...|.:|..||...
BPUM_0615___y 1 MQPITR-IRSWMREHQDEAIALLQQMVQCESTQGNEQKVQQIVANKLSAI 49
BSNT_03219___ 51 HMDIDVWEPSIKQLKQHPYFKSNRSDFHESPNIVAKKTGAGEGRSLILNG 100
..|:||||...:.|.:||||.|.|..|..|||:..:..|.|:|:|::|||
BPUM_0615___y 50 GFDVDVWEIGGEDLLEHPYFYSPRRSFKGSPNVAGRLKGKGDGKSILLNG 99
BSNT_03219___ 101 HIDVVPEGSVKDWKYEPYQAVEENGKIYGRGSTDMKGGNTALLFALEALH 150
|:||||.|..|.|.|.||.....||::||||:|||||||.:|||||||||
BPUM_0615___y 100 HVDVVPAGDTKQWTYPPYSGHIINGRLYGRGATDMKGGNVSLLFALEALH 149
BSNT_03219___ 151 ACDVKLKGDVLFQSVVDEECGGAGTLSAIMRGYRADGALIPEPTNMKLFI 200
|..:.|||||:|.|||:||.||||||:||:|||.||.|:||||::||:|.
BPUM_0615___y 150 ALQIPLKGDVVFHSVVEEESGGAGTLAAILRGYTADAAIIPEPSHMKIFP 199
BSNT_03219___ 201 KQQGSMWFRITVKGLSAHGGTRYEGVSAIEKSMHVITALQELEKVRNARI 250
.||||.|||:.:||.:|||||||.|||||||||.|::.:..||:.||.||
BPUM_0615___y 200 IQQGSKWFRLHIKGRAAHGGTRYHGVSAIEKSMVVLSHVAALEEERNQRI 249
BSNT_03219___ 251 SDPLYDNIPIPVPVNIGTISGGAWPSSVADRVVIEGRCGIAPHEKTEAVK 300
::||:.:||||:|:|||.|.||.|||||||.|.:|||.|:.|.|..|..:
BPUM_0615___y 250 TEPLFQHIPIPIPINIGKIQGGDWPSSVADLVTMEGRLGVMPGETVEQAE 299
BSNT_03219___ 301 LELENWLKDLEYHDEWFKRHPVQVEWFGAQWLPNDLPDDHPLISVLQSAY 350
.|||||:..|...|||||.|||:||||||:|||..:..:|||:.:|:..|
BPUM_0615___y 300 KELENWMMGLGEKDEWFKEHPVEVEWFGARWLPGSIDTNHPLLGLLKEQY 349
BSNT_03219___ 351 QKMKQTEPIIEASPWGTDGGLLYHAGDTPVIVFGPGETKTAHQANEYIEV 400
:.:|:..|.|||:|||||||||..|...|:||||||.|:.||..||.|::
BPUM_0615___y 350 EAVKKEPPKIEAAPWGTDGGLLSQAAGIPIIVFGPGTTELAHFPNESIDI 399
BSNT_03219___ 401 EAMIESAKIIALFVMDWCGLHTDGEDADAQVNKE 434
|.:||:|:|||..:::|| |.|:|:
BPUM_0615___y 400 EHVIEAAEIIAGTMVEWC------EAAEAE---- 423
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