Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03220 and BPUM_0614

See DNA alignment / Visit BSNT_03220 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_03220___yodR.1.24716.seq
#    -bsequence pep-align/BPUM_0614___yodR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03220___yodR-BPUM_0614___yodR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03220___yodR-BPUM_0614___yodR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03220___yodR
# 2: BPUM_0614___yodR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity:     127/221 (57.5%)
# Similarity:   159/221 (71.9%)
# Gaps:           4/221 ( 1.8%)
# Score: 640.0
# 
#
#=======================================

BSNT_03220___      1 MGLG-VAEREQIAKRAATEIKQGMIVNLGIGIPSLVPNFLKPDMQVMFQA     49
                     ||:| :..|.:||||||.||:.|||||||||||:|...::.....|...|
BPUM_0614___y      1 MGMGDIDLRHRIAKRAAQEIEDGMIVNLGIGIPTLAAEYIPAHYNVWLHA     50

BSNT_03220___     50 ENGVLGIGESPEKGEEDAHLCNAAGYPVRAVKGASYFDTTMSFAMIRKGK     99
                     |||::|.|.||.:||||.:||||.|||:...||.||.|:|.:|.:||||.
BPUM_0614___y     51 ENGIMGAGASPVQGEEDPNLCNAGGYPITLTKGGSYMDSTTAFGIIRKGM    100

BSNT_03220___    100 IDITILGALQVSQSGDLANWLVPGKKVPGMGGAMELAQKAKKVVVVMSHT    149
                     :|:||||||:||..||||||:||||:|||||||:|||||||||||||||.
BPUM_0614___y    101 LDMTILGALEVSSQGDLANWIVPGKRVPGMGGAIELAQKAKKVVVVMSHL    150

BSNT_03220___    150 DQKGRPKLTERCTLPLTAAGCVDLIITEKAVLEVDSHHFILKELMNGSTI    199
                     |:.|:.|:...|||||||..|||||||:.||:||.|...||:|:|.....
BPUM_0614___y    151 DKHGQSKVKSACTLPLTAKSCVDLIITDMAVIEVKSQLLILREVMPPFQP    200

BSNT_03220___    200 DEVTRLTEAEIKIDMPFS---    217
                     ::|.|.|||.:.:.....   
BPUM_0614___y    201 EDVIRATEAPLILAPDVKSVV    221


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