Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03220 and BPUM_0614
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_03220___yodR.1.24716.seq
# -bsequence pep-align/BPUM_0614___yodR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03220___yodR-BPUM_0614___yodR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03220___yodR-BPUM_0614___yodR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03220___yodR
# 2: BPUM_0614___yodR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 127/221 (57.5%)
# Similarity: 159/221 (71.9%)
# Gaps: 4/221 ( 1.8%)
# Score: 640.0
#
#
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BSNT_03220___ 1 MGLG-VAEREQIAKRAATEIKQGMIVNLGIGIPSLVPNFLKPDMQVMFQA 49
||:| :..|.:||||||.||:.|||||||||||:|...::.....|...|
BPUM_0614___y 1 MGMGDIDLRHRIAKRAAQEIEDGMIVNLGIGIPTLAAEYIPAHYNVWLHA 50
BSNT_03220___ 50 ENGVLGIGESPEKGEEDAHLCNAAGYPVRAVKGASYFDTTMSFAMIRKGK 99
|||::|.|.||.:||||.:||||.|||:...||.||.|:|.:|.:||||.
BPUM_0614___y 51 ENGIMGAGASPVQGEEDPNLCNAGGYPITLTKGGSYMDSTTAFGIIRKGM 100
BSNT_03220___ 100 IDITILGALQVSQSGDLANWLVPGKKVPGMGGAMELAQKAKKVVVVMSHT 149
:|:||||||:||..||||||:||||:|||||||:|||||||||||||||.
BPUM_0614___y 101 LDMTILGALEVSSQGDLANWIVPGKRVPGMGGAIELAQKAKKVVVVMSHL 150
BSNT_03220___ 150 DQKGRPKLTERCTLPLTAAGCVDLIITEKAVLEVDSHHFILKELMNGSTI 199
|:.|:.|:...|||||||..|||||||:.||:||.|...||:|:|.....
BPUM_0614___y 151 DKHGQSKVKSACTLPLTAKSCVDLIITDMAVIEVKSQLLILREVMPPFQP 200
BSNT_03220___ 200 DEVTRLTEAEIKIDMPFS--- 217
::|.|.|||.:.:.....
BPUM_0614___y 201 EDVIRATEAPLILAPDVKSVV 221
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