Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03221 and BPUM_0613
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_03221___yodS.1.24716.seq
# -bsequence pep-align/BPUM_0613___atoD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03221___yodS-BPUM_0613___atoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03221___yodS-BPUM_0613___atoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03221___yodS
# 2: BPUM_0613___atoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 135/232 (58.2%)
# Similarity: 170/232 (73.3%)
# Gaps: 7/232 ( 3.0%)
# Score: 704.0
#
#
#=======================================
BSNT_03221___ 1 MAPFQKAISIDTAIADVRDGSVLMFGGFGGVGSPPSLIEAILDSGITDLT 50
..|.:::|..|...|:...:|||||||||||||||:|||::.|.|||
BPUM_0613___a 1 ---MNKTVNVDEVITHFRNDMTIMFGGFGGVGSPPSLIDAILEANIKDLT 47
BSNT_03221___ 51 VICNDAGFPDIGIGPLIVNQRVKTLIASHIGSNPVAGKQMTEGTLEVQFS 100
:|.||||||.||:|.||...|||.:|||||||||:||::|..|||:|.|.
BPUM_0613___a 48 LIGNDAGFPQIGVGRLITEGRVKKIIASHIGSNPIAGQKMQAGTLDVHFY 97
BSNT_03221___ 101 PQGTLAERIRAGGAGLGGILTDVGIDNPMVCEKKDIVTVAGKRYLIEEAL 150
|||.|||:|||||.||.||:||||:|: :..:||.:|.:.||.|::|.||
BPUM_0613___a 98 PQGILAEKIRAGGMGLAGIVTDVGMDS-LNLDKKQLVPLNGKTYILEPAL 146
BSNT_03221___ 151 TADFAFINAYIADEFGNLTYDKTARNMNPLMAMAARRTFAEAERIVPMGE 200
|||.|.:||..|||.|||.:||:|||.||::|||...|.||.|.|||:|.
BPUM_0613___a 147 TADMAIVNALKADEAGNLIFDKSARNTNPIVAMAGDWTIAEVEEIVPVGH 196
BSNT_03221___ 201 ISEEMIVTPGVFVKGVVRSEGVKWKWAWE--- 229
:..|.||||||||..:|:|:||.|.||||
BPUM_0613___a 197 LHPEEIVTPGVFVNQIVQSKGVNWTWAWETSI 228
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