Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03222 and BPUM_0612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_03222___yodT.1.24716.seq
# -bsequence pep-align/BPUM_0612___yodT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03222___yodT-BPUM_0612___yodT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03222___yodT-BPUM_0612___yodT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03222___yodT
# 2: BPUM_0612___yodT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 242/454 (53.3%)
# Similarity: 317/454 (69.8%)
# Gaps: 10/454 ( 2.2%)
# Score: 1251.0
#
#
#=======================================
BSNT_03222___ 1 --MSSYLIKPELSSAYPVVSYAKGSYVYDQTGKKYLDGSSGAVTCNIGHG 48
...|||||.|:..|||....:|.|:||:.||||:||||||||.:||||
BPUM_0612___y 1 METRDYLIKPMLNQHYPVAVKGEGIYLYDRDGKKYIDGSSGAVTASIGHG 50
BSNT_03222___ 49 VRDVTEKLKEQLDQVSFAYRSQFTSEPAEQLAALLAQELPGDVNWSFFVN 98
:|::.:.:.||.::|||.||||||:||||.||..|::..||::||||||.
BPUM_0612___y 51 IREIIDAMTEQAEKVSFTYRSQFTNEPAEDLAYELSKLCPGNLNWSFFVG 100
BSNT_03222___ 99 SGSEAIETAMKIAIQYWQEKKQTQKSIFLSRWSSYHGITLGALSLSGFYE 148
|||||.|||||||||:|||:.:.:|:..:|||.|||||||||||:||...
BPUM_0612___y 101 SGSEATETAMKIAIQHWQEQGKAEKNHIISRWMSYHGITLGALSMSGHIA 150
BSNT_03222___ 149 RRYRFTHLIERYPAISAPHIYRLNYETEE-DFVQTAADELDTMIKRIGSQ 197
||.||..|:|:.|.:|.|:.||.....|| ..|:....|..|:|:|||.:
BPUM_0612___y 151 RRERFEPLLEKNPVLSPPYSYRSWLPKEEGKQVEWYVQEFKTVIQRIGKE 200
BSNT_03222___ 198 FIAGFVAEPIIGAAGAAITPPPGYYERLSEVCRTHDVLFIADEVMTGLGR 247
.||.|:||||:||:|||:.||.||:|.:..||..:|:|.||||||||.||
BPUM_0612___y 201 RIAAFIAEPIVGASGAALVPPDGYFEAMKRVCEENDILMIADEVMTGFGR 250
BSNT_03222___ 248 TGRMLATEHWDTVPDIAVLGKGLGAGYAPIAAAVVSDSIIETIKQGSGVI 297
||:|.|.|||..||||.|||||:.|||:||||||.:|.:|..|..|||.:
BPUM_0612___y 251 TGKMFAMEHWGVVPDIMVLGKGMSAGYSPIAAAVSADHVIAPILSGSGSV 300
BSNT_03222___ 298 MSGHTYSAHPYSAKAALEVLRYVLKHGLIKQSEKKGAVLKKKLDEAASQS 347
|:|||||.:|.||..:|.|:||:.||.|.::::..|..|...|.|..:..
BPUM_0612___y 301 MAGHTYSGNPLSAAVSLAVIRYMKKHQLPERADLSGRYLMNALKEVQTNH 350
BSNT_03222___ 348 GIIGDVRGKGLLLGIEFVADQKTKKVFPPEQAVTQLIVSEAKKRGLIVYP 397
.|||||||||||:|||||||:.:|..||....:|.|:|..||:.||:|||
BPUM_0612___y 351 FIIGDVRGKGLLIGIEFVADRLSKTPFPAHAQMTHLVVETAKQNGLLVYP 400
BSNT_03222___ 398 SKAGIDSGEGDAVIIAPPFTISDVEMEELISIFSETVAAVEKNLKKD--- 444
:.||.|...|.|::||||.:|:..||:|||.:|.:|:..||:.:...
BPUM_0612___y 401 ASAGEDGVGGAAIMIAPPLSITQQEMDELIQLFEQTITQVEQEVINRGFF 450
BSNT_03222___ 444 ---- 444
BPUM_0612___y 451 PSAM 454
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