Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03217 and BPUM_0610

See DNA alignment / Visit BSNT_03217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_03217___yodP.1.24716.seq
#    -bsequence pep-align/BPUM_0610.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03217___yodP-BPUM_0610.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03217___yodP-BPUM_0610.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03217___yodP
# 2: BPUM_0610
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     114/284 (40.1%)
# Similarity:   166/284 (58.5%)
# Gaps:          12/284 ( 4.2%)
# Score: 544.5
# 
#
#=======================================

BSNT_03217___      1 --MLKSIKSSGVTAVLDHDGFNKRIRVVRYDGAIEKVLPDIVAAAKEENA     48
                       .||.:.:...:|::..|.||:|||:..|.|.:..|:..::..|.:..|
BPUM_0610          1 MVQLKKLANERFSALICIDSFNERIRLDDYSGRVRDVIQSVLQEASDCKA     50

BSNT_03217___     49 EKIIVYAKQHDEPMLAKQLFAPEGYLKGYYLGHSACVMVRYLSESRRQTD     98
                     .|:||..::...|:..::.|..||....|:||..|..|..:|:|.|..:.
BPUM_0610         51 SKVIVKVRREHVPLFLEKGFRLEGVFSHYFLGSDAYGMSLFLTEDRMNSS    100

BSNT_03217___     99 SYTEEQEIIEAIYRTAPRLRNDS---KPVFTMRKAETNDMYQLSMLYKKV    145
                     .:.||.||:.:|  .|..::.|.   :..:.||||:..|:::|:.||..|
BPUM_0610        101 YWLEEDEIVASI--QAKEIKEDQGTWQDEYVMRKADPKDIHKLAKLYDTV    148

BSNT_03217___    146 FRTYPTPVFDPAYIEKTMNANTVYYIMFDHD-RLISAASAEINPELGHAE    194
                     |.|||||:.:..||||.|...|::|:: :|| .::||||||||...||||
BPUM_0610        149 FETYPTPMNESDYIEKVMEEGTIFYVV-EHDGHIVSAASAEINAPYGHAE    197

BSNT_03217___    195 ITDCAVLPEYRGHSLTSFLIEALEKEMAGKDIFHVFSLARASSFGMNAVL    244
                     :||||.||.||.......||.|||||:....||..:|||||.|:|||.|.
BPUM_0610        198 LTDCATLPSYRKLGFMHHLILALEKELQSMHIFVFYSLARALSYGMNQVF    247

BSNT_03217___    245 YHSGYQYGGRLINNCFIAEGLENMNIWCKQL---    275
                     |..||.|.||..|||:|.:.:|:||:|.|..   
BPUM_0610        248 YQLGYTYTGRFQNNCYIFDKIEDMNLWVKTPNES    281


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