Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01095 and BPUM_0593

See DNA alignment / Visit BSNT_01095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_01095___yebC.1.24716.seq
#    -bsequence pep-align/BPUM_0593___yebC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01095___yebC-BPUM_0593___yebC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01095___yebC-BPUM_0593___yebC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01095___yebC
# 2: BPUM_0593___yebC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:      88/270 (32.6%)
# Similarity:   150/270 (55.6%)
# Gaps:           7/270 ( 2.6%)
# Score: 424.0
# 
#
#=======================================

BSNT_01095___      1 MTEERKETFEEEINQSERIDADEEPLSRMSRKASRQSKQKQKQKQKPRQE     50
                     |.|:.:|....::...|.....|...||:||.|   :|:.:..|.|...:
BPUM_0593___y      1 MLEKDEEQSTSDLKIEEPSIDQETRQSRLSRSA---AKRGRTSKAKAASD     47

BSNT_01095___     51 RGESTVKDKLASVWAAINRYCGFAFSILKSPAKTVVTDGFSHYKYGLISM    100
                     ...||::..|..|..|..||..:..::||||::.:........||..||:
BPUM_0593___y     48 DERSTIQRMLQGVGGAFKRYSSYGLAMLKSPSQAINQAETLRMKYAWISI     97

BSNT_01095___    101 LIFSIIFSIGNWFQLKASWNRPLGFGERHHAFYDGFLVVLVYLLIFFAVM    150
                     ::||:.|::||:.|||||..|.|||| .|::|.|.||.|.::.||...:|
BPUM_0593___y     98 VLFSVFFALGNYVQLKASKTRLLGFG-IHYSFGDAFLRVAIFTLILLTLM    146

BSNT_01095___    151 VFAIWAVSRYMMKQKVTFREAAAVLGSLLVPVIAVSILWLIFAIVNIPML    200
                     :..:|.:.:||:|..::.:|.....|:.||||:.:|||||:||::|||.:
BPUM_0593___y    147 MLTVWLLGKYMLKGNISLKEVIMKFGAALVPVLVLSILWLVFAMLNIPYV    196

BSNT_01095___    201 TVLFTVLILFSIFFIIALYVQRVYQAAQDAPIDYIYCVFAVVAIALLFTA    250
                     ||:.:|::.|.:..|..:..:.:....:.|..|.:|..:..:.:.|:..|
BPUM_0593___y    197 TVILSVMMFFGLQLIAVVLFRSIQSDHKTARGDLMYTGWVFLLVELVIIA    246

BSNT_01095___    251 VTWPFISEYFTASLIPL---    267
                     :.|..:.||...||:|:   
BPUM_0593___y    247 LLWAIVGEYLIPSLVPVRFG    266


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.