Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05140 and BPUM_0591

See DNA alignment / Visit BSNT_05140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_05140___yvbU.1.24716.seq
#    -bsequence pep-align/BPUM_0591___lysR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05140___yvbU-BPUM_0591___lysR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05140___yvbU-BPUM_0591___lysR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05140___yvbU
# 2: BPUM_0591___lysR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     127/303 (41.9%)
# Similarity:   182/303 (60.1%)
# Gaps:          16/303 ( 5.3%)
# Score: 581.5
# 
#
#=======================================

BSNT_05140___      1 MTITQLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIR     50
                     |:..:..:..|:.|.||||.|.:||||||.|||||::::|.|.||.|.||
BPUM_0591___l      1 MSFVRFDIVAKVVELGSFTAAAEALNMTQSAVSHAVASLETEWDVSLFIR     50

BSNT_05140___     51 DRRNGLMLTDTGKQILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFS    100
                     ||:.|:||||.|:.:|.||||||..:||::|..|..|.:|.|.|.||||:
BPUM_0591___l     51 DRKKGIMLTDIGQTLLPHIREVLNRLEKIQQEIALTKNIETGLIRIGTFA    100

BSNT_05140___    101 TASAYFMPKLISEFKQKYPKLELVLHEGTVNEVKEWLHTRMIDVGILL--    148
                     :|||..:|||:..:::|:||:|...:|||..|:.|||.:.:||||.::  
BPUM_0591___l    101 SASACLLPKLLVSYQKKHPKIEFKFYEGTYEEILEWLDSGIIDVGFVVKG    150

BSNT_05140___    149 YPTEEMEYIHLKKDKMAVVLRDDHPLAGHSAITLKDLDHEPMIVCDGGYE    198
                     |..|..:.:.|.||:|.|....:|.....|.:.:.||..||.|:..|.|:
BPUM_0591___l    151 YADEAFDLLPLIKDEMVVAYHPNHRFHQQSIVDITDLADEPFIMPTGMYQ    200

BSNT_05140___    199 SPFVDMFRQAGATLHPA--FTVYNINTSISMIREGLGLAILSEMSMSGMP    246
                     |...|:|  |.|.|.||  |.|::..|...|:.||||:.|..|:.:....
BPUM_0591___l    201 SHVEDIF--AEAQLKPATLFEVHDCTTIARMVGEGLGVTIGPELFLKTQQ    248

BSNT_05140___    247 LPEHVVTRELDPQVYRDVQLAVPSLKEASLAAKLFIEMAKELFGAE----    292
                     |   |..|:|:...:|:|.||.|||.:||.|.|.|..:|:.:|..|    
BPUM_0591___l    249 L---VHIRQLNVSHHREVALACPSLSQASPAVKEFFHVAEAVFAKEKDLE    295

BSNT_05140___    292 ---    292
                        
BPUM_0591___l    296 KGV    298


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