Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03073 and BPUM_0586
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03073___yoaA.1.24716.seq
# -bsequence pep-align/BPUM_0586.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03073___yoaA-BPUM_0586.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03073___yoaA-BPUM_0586.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03073___yoaA
# 2: BPUM_0586
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 76/190 (40.0%)
# Similarity: 112/190 (58.9%)
# Gaps: 15/190 ( 7.9%)
# Score: 353.0
#
#
#=======================================
BSNT_03073___ 1 --------MFPILETDRLTLRQITDQDAEAIFACFSNDEVTRYYGLENME 42
.||.:.|:||.|:|.|.:|||.:....||:.|.||.|::..|
BPUM_0586 1 MNKINFPQTFPTIHTERLILKQATIEDAEDMHIYLSNETVCRYMGIDAHE 50
BSNT_03073___ 43 SIEQAISMIQTFAALYQEKRGIRWGIERRDTKELIGTIGFHALAQKHRRA 92
|||.....|:.:..:::|:.||||||..:|...:||:.||..|.::|.|.
BPUM_0586 51 SIEDTKGEIKWYDNIFKEQTGIRWGISLKDDPAIIGSCGFLNLEKQHCRT 100
BSNT_03073___ 93 EIGYEIIPEHWRNGFASEVISKVVSYGFSALGLSRIGAVVFTANEASNRL 142
|||||:..:|||.|..||.|..|:.|||..:.|:||.|::..||.:|.:|
BPUM_0586 101 EIGYELHHDHWRKGIMSEAIVAVLRYGFQEMNLNRIEAIIDPANTSSVQL 150
BSNT_03073___ 143 LLKMGFQKEGVLRQY-MYQNGIPYDTNVYSIVKPRE---- 177
|....|.:||:||:| :.|:|.. |..:|||:| |:
BPUM_0586 151 LENFDFVREGLLREYDLGQHGFD-DVFMYSILK-RDYNTQ 188
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