Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03073 and BPUM_0586

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03073___yoaA.1.24716.seq
#    -bsequence pep-align/BPUM_0586.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03073___yoaA-BPUM_0586.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03073___yoaA-BPUM_0586.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03073___yoaA
# 2: BPUM_0586
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity:      76/190 (40.0%)
# Similarity:   112/190 (58.9%)
# Gaps:          15/190 ( 7.9%)
# Score: 353.0
# 
#
#=======================================

BSNT_03073___      1 --------MFPILETDRLTLRQITDQDAEAIFACFSNDEVTRYYGLENME     42
                             .||.:.|:||.|:|.|.:|||.:....||:.|.||.|::..|
BPUM_0586          1 MNKINFPQTFPTIHTERLILKQATIEDAEDMHIYLSNETVCRYMGIDAHE     50

BSNT_03073___     43 SIEQAISMIQTFAALYQEKRGIRWGIERRDTKELIGTIGFHALAQKHRRA     92
                     |||.....|:.:..:::|:.||||||..:|...:||:.||..|.::|.|.
BPUM_0586         51 SIEDTKGEIKWYDNIFKEQTGIRWGISLKDDPAIIGSCGFLNLEKQHCRT    100

BSNT_03073___     93 EIGYEIIPEHWRNGFASEVISKVVSYGFSALGLSRIGAVVFTANEASNRL    142
                     |||||:..:|||.|..||.|..|:.|||..:.|:||.|::..||.:|.:|
BPUM_0586        101 EIGYELHHDHWRKGIMSEAIVAVLRYGFQEMNLNRIEAIIDPANTSSVQL    150

BSNT_03073___    143 LLKMGFQKEGVLRQY-MYQNGIPYDTNVYSIVKPRE----    177
                     |....|.:||:||:| :.|:|.. |..:|||:| |:    
BPUM_0586        151 LENFDFVREGLLREYDLGQHGFD-DVFMYSILK-RDYNTQ    188


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