Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00830 and BPUM_0580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:35
# Commandline: needle
# -asequence pep-align/BSNT_00830___ydcL.1.24716.seq
# -bsequence pep-align/BPUM_0580___int.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00830___ydcL-BPUM_0580___int.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00830___ydcL-BPUM_0580___int.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00830___ydcL
# 2: BPUM_0580___int
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 97/443 (21.9%)
# Similarity: 183/443 (41.3%)
# Gaps: 93/443 (21.0%)
# Score: 322.0
#
#
#=======================================
BSNT_00830___ 1 MSVKKL------------ENGQYQVDVSFGFDPITGERIRT--------R 30
:||. |.|::.....||.|.|||:|||. :
BPUM_0580___i 1 --MKKKQEKTKYPGVYIDEKGRFFYQSEFGIDRITGKRIRKKGRKDANGK 48
BSNT_00830___ 31 PVASTRKEALELEAKLRREFQEERARKSRSVSFPTLIS-IYLANCEIDSK 79
|.||..:...|| .:|:||:.:.....:..:::...:: :|:...:.:.:
BPUM_0580___i 49 PFASAFEANKEL-TRLKREYHKVNNFSNYKMTYEQFMNQVYIPYYQTEVE 97
BSNT_00830___ 80 PNYYQNQKYIINKHISDYFLKSDIQKITHREITDFRKHLMET------GL 123
.:.::.::.|:.| |.|.|....::.|:..::.:||..|:.: |.
BPUM_0580___i 98 ESTFEVREGILEK-IKDRFGSMSLRSISIEDVQNFRTWLLTSKKRGGAGY 146
BSNT_00830___ 124 SNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKRLPLTRKKMKFWRPEE 173
|....:.:.....:..|.||..:.|:.|....||.:|..:..:.:|..||
BPUM_0580___i 147 SQSYASMVFGVFRQSLDKAVDMQYLEYNISKKVKAIPKGKAVVAYWTKEE 196
BSNT_00830___ 174 FKKFISLIPQDQLLFKTFYT--------VAFLTGLRCGEMLALQWKDIDK 215
|::.| :|:....||. |.::||:|..|..||.|.|||.
BPUM_0580___i 197 FEQVI-----NQIYIDDFYEHLNFVMIWVYYMTGIRVNEGTALNWSDIDL 241
BSNT_00830___ 216 ILLEIDVH-----KSCT-WLDGQFVVTTPKTKNSIRRVSINKKLLKLLES 259
....:.|| |:.| |....:. ||::..|.::::...:.:|:.
BPUM_0580___i 242 KKKRMRVHHMLILKTRTEWKRNSYT----KTEDGKRTIALDDDTINILKV 287
BSNT_00830___ 260 WKEAQEELFNELGIRHSHDTYIFQYKDTPSRKDIFSRKIKYFCKDSDLTP 309
|:|.| |...|| ..|.::|.|...|..|....|.:..:.|.:.:..
BPUM_0580___i 288 WRERQ--LTIGLG---KVDDFVFSYDGLPMIKSTIGRMLSRYAKLAGVKK 332
BSNT_00830___ 310 IRLHDFRHSHVALLIHQ-GEDYITIKERLGHGSVKTTIDVYGHLYPNKQK 358
|:....||||.:.||:: ....:.:.:|:||.|.:.|:..|.|::.....
BPUM_0580___i 333 IQAKGLRHSHASYLINEFNVSVLVLSQRMGHSSPEITLKHYAHMWTGADN 382
BSNT_00830___ 359 EMADKLDDLL--------------------------------- 368
.:|:.:...:
BPUM_0580___i 383 TIAEMMAGNINIKTASETKLRFNGNQAINKQNPTKNPTKVAKG 425
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