Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00830 and BPUM_0580

See DNA alignment / Visit BSNT_00830 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence pep-align/BSNT_00830___ydcL.1.24716.seq
#    -bsequence pep-align/BPUM_0580___int.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00830___ydcL-BPUM_0580___int.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00830___ydcL-BPUM_0580___int.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00830___ydcL
# 2: BPUM_0580___int
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity:      97/443 (21.9%)
# Similarity:   183/443 (41.3%)
# Gaps:          93/443 (21.0%)
# Score: 322.0
# 
#
#=======================================

BSNT_00830___      1 MSVKKL------------ENGQYQVDVSFGFDPITGERIRT--------R     30
                       :||.            |.|::.....||.|.|||:|||.        :
BPUM_0580___i      1 --MKKKQEKTKYPGVYIDEKGRFFYQSEFGIDRITGKRIRKKGRKDANGK     48

BSNT_00830___     31 PVASTRKEALELEAKLRREFQEERARKSRSVSFPTLIS-IYLANCEIDSK     79
                     |.||..:...|| .:|:||:.:.....:..:::...:: :|:...:.:.:
BPUM_0580___i     49 PFASAFEANKEL-TRLKREYHKVNNFSNYKMTYEQFMNQVYIPYYQTEVE     97

BSNT_00830___     80 PNYYQNQKYIINKHISDYFLKSDIQKITHREITDFRKHLMET------GL    123
                     .:.::.::.|:.| |.|.|....::.|:..::.:||..|:.:      |.
BPUM_0580___i     98 ESTFEVREGILEK-IKDRFGSMSLRSISIEDVQNFRTWLLTSKKRGGAGY    146

BSNT_00830___    124 SNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKRLPLTRKKMKFWRPEE    173
                     |....:.:.....:..|.||..:.|:.|....||.:|..:..:.:|..||
BPUM_0580___i    147 SQSYASMVFGVFRQSLDKAVDMQYLEYNISKKVKAIPKGKAVVAYWTKEE    196

BSNT_00830___    174 FKKFISLIPQDQLLFKTFYT--------VAFLTGLRCGEMLALQWKDIDK    215
                     |::.|     :|:....||.        |.::||:|..|..||.|.|||.
BPUM_0580___i    197 FEQVI-----NQIYIDDFYEHLNFVMIWVYYMTGIRVNEGTALNWSDIDL    241

BSNT_00830___    216 ILLEIDVH-----KSCT-WLDGQFVVTTPKTKNSIRRVSINKKLLKLLES    259
                     ....:.||     |:.| |....:.    ||::..|.::::...:.:|:.
BPUM_0580___i    242 KKKRMRVHHMLILKTRTEWKRNSYT----KTEDGKRTIALDDDTINILKV    287

BSNT_00830___    260 WKEAQEELFNELGIRHSHDTYIFQYKDTPSRKDIFSRKIKYFCKDSDLTP    309
                     |:|.|  |...||   ..|.::|.|...|..|....|.:..:.|.:.:..
BPUM_0580___i    288 WRERQ--LTIGLG---KVDDFVFSYDGLPMIKSTIGRMLSRYAKLAGVKK    332

BSNT_00830___    310 IRLHDFRHSHVALLIHQ-GEDYITIKERLGHGSVKTTIDVYGHLYPNKQK    358
                     |:....||||.:.||:: ....:.:.:|:||.|.:.|:..|.|::.....
BPUM_0580___i    333 IQAKGLRHSHASYLINEFNVSVLVLSQRMGHSSPEITLKHYAHMWTGADN    382

BSNT_00830___    359 EMADKLDDLL---------------------------------    368
                     .:|:.:...:                                 
BPUM_0580___i    383 TIAEMMAGNINIKTASETKLRFNGNQAINKQNPTKNPTKVAKG    425


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