Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00849 and BPUM_0572

See DNA alignment / Visit BSNT_00849 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence pep-align/BSNT_00849___yddC.1.24716.seq
#    -bsequence pep-align/BPUM_0572___yddC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00849___yddC-BPUM_0572___yddC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00849___yddC-BPUM_0572___yddC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00849___yddC
# 2: BPUM_0572___yddC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      35/86 (40.7%)
# Similarity:    57/86 (66.3%)
# Gaps:           4/86 ( 4.7%)
# Score: 186.5
# 
#
#=======================================

BSNT_00849___      1 MDFMNFFILGA----DLPTLGGVKGWASDVVIQFITIVVMFIAAKNLMRL     46
                     |:|::|.:|||    ||||||.:|.||..||.|.|.||.:|:..|.|:::
BPUM_0572___y      1 MEFLDFLVLGAKAGSDLPTLGDLKSWAKQVVEQAIYIVTIFVVCKFLIKM     50

BSNT_00849___     47 KMGGIIFVCCIGSAVTWVIKHWSEFSGWINALMEKL     82
                     .:|.|:.:..:.||:.:.:::||..:||..||::.|
BPUM_0572___y     51 SIGKIVGIIALASALVFAVRNWSMVTGWGGALLKLL     86


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