Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00846 and BPUM_0571
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:36
# Commandline: needle
# -asequence pep-align/BSNT_00846.1.24716.seq
# -bsequence pep-align/BPUM_0571___yddB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00846-BPUM_0571___yddB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00846-BPUM_0571___yddB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00846
# 2: BPUM_0571___yddB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity: 171/359 (47.6%)
# Similarity: 238/359 (66.3%)
# Gaps: 33/359 ( 9.2%)
# Score: 825.5
#
#
#=======================================
BSNT_00846 1 MLNKEIGSDKK---EESFFRSAF-QKLKRIERPEKDKQKVPRDRSKLIAV 46
.|:..:|.| |.:...||| :|||.:::|||..:.:|:||||:||:
BPUM_0571___y 1 --MKKKKNDGKMVIENNPLLSAFKKKLKGVKKPEKKSKSIPKDRSKMIAI 48
BSNT_00846 47 TLWSCVGGLLFICLLAVLLSINTRSQLNDMKDEANKPTND-DKQKISVTA 95
.:||.:..|:|...|:|||||||||.:||: |.|:..|. .|:::|:.|
BPUM_0571___y 49 GIWSMIATLIFFAFLSVLLSINTRSVVNDI--ERNQVKNSKQKEEVSIVA 96
BSNT_00846 96 AENFLSGFINEYVNVKNNQESIEKRIQSLESYMVKQEDNHFEDEERFNVD 145
.|.||||||.:|:||||.:.:.|:|..:|..|:| .|:..:.|..|:..
BPUM_0571___y 97 GERFLSGFIEQYINVKNERAAAEQRQNTLMKYLV--ADDEIDQETWFDTS 144
BSNT_00846 146 GLKGDRELKDYSLYNVKEGDKNSLFQYKVTYENLYPVEKEVEKEVKDGKK 195
|.:|||.|.||.|||||:||.:|||||||.|||: ||..||
BPUM_0571___y 145 GAQGDRVLNDYVLYNVKKGDGDSLFQYKVNYENV----------VKVKKK 184
BSNT_00846 196 KKKVKEKVKTNEKSEKQMLLNIPVTNKDDSFAVSAVPYFTQIYDLKGDIA 245
:.|| |||.||||||.:|.|.|||:..||.::|||||||||
BPUM_0571___y 185 EHKV----------EKQALLNIPVKHKGDKFAVNGTPYLSEIYDLKGDIA 224
BSNT_00846 246 FKGKEETRDEYAGEKKESIESFLQNFFEKYASEKKEEMVYMMKKPEALEG 295
..:|.|:||.|::..:|:.||..||.|||.|.|::|.|:||.||.|.|
BPUM_0571___y 225 --NTKEDREEYDGDQTAAIKEFLNTFFRKYAEESKDDMSYVMKTPETLNG 272
BSNT_00846 296 NLLFGEVQSVKIFETKKGFEVFCAVRFKEKENDIPVNEKFSLEITENSGQ 345
:|:||:|::::|::...||||.....|||||.::||.|:|:|.|.:||||
BPUM_0571___y 273 HLVFGDVENIRIYKKGDGFEVSSVAVFKEKETNLPVKERFTLFIVKNSGQ 322
BSNT_00846 346 FYVNKLKHQ 354
:|||:||||
BPUM_0571___y 323 YYVNQLKHQ 331
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