Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00841 and BPUM_0556

See DNA alignment / Visit BSNT_00841 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence pep-align/BSNT_00841.1.24716.seq
#    -bsequence pep-align/BPUM_0556.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00841-BPUM_0556.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00841-BPUM_0556.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00841
# 2: BPUM_0556
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      37/88 (42.0%)
# Similarity:    52/88 (59.1%)
# Gaps:           8/88 ( 9.1%)
# Score: 166.5
# 
#
#=======================================

BSNT_00841         1 --MVVHHLKIYPEYYDAVLKDVKKFEIRKNDRFYMVGDTLVLHEWMD-EF     47
                       ..||.|||.|:|..|:...:|.||||||||.:.|||.|.|.|:.| ::
BPUM_0556          1 MNETVHDLKIMPQYLWAIKTGIKGFEIRKNDREFQVGDILRLREYKDGQY     50

BSNT_00841        48 TGRKLEAQIIYITDYKQRPGYVVLGIERTK--GGIVHV     83
                     |||.:..:|.:||.::|:..||||..:|.|  ..:   
BPUM_0556         51 TGRLVLGRITFITSFEQKDDYVVLNFKRLKLDQAV---     85


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