Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00839 and BPUM_0554
See
DNA alignment /
Visit
BSNT_00839 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:35
# Commandline: needle
# -asequence pep-align/BSNT_00839.1.24716.seq
# -bsequence pep-align/BPUM_0554___ydcQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00839-BPUM_0554___ydcQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00839-BPUM_0554___ydcQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00839
# 2: BPUM_0554___ydcQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 143/473 (30.2%)
# Similarity: 173/473 (36.6%)
# Gaps: 265/473 (56.0%)
# Score: 758.5
#
#
#=======================================
BSNT_00839 0 -------------------------------------------------- 0
BPUM_0554___y 1 MVLWKYRGIRIRRYTRNNLRITGALISVPVFLLLMILFWRSHLWDVYEKG 50
BSNT_00839 0 -------------------------------------------------- 0
BPUM_0554___y 51 IEDTFENFTFNIPLIVKSLLVSIIVPVALILVWYFIFHQSYKKIYHRQKI 100
BSNT_00839 0 -------------------------------------------------- 0
BPUM_0554___y 101 ARMIFSNKFYESKSVRSKITEKTVQKISYFPKFYYRVKDNHIIIKIAMDM 150
BSNT_00839 0 -------------------------------------------------- 0
BPUM_0554___y 151 SRFQQRFMELGREFENGLFCDLVSTDMEDGYFTYKLLYDAGRNRIGINEA 200
BSNT_00839 1 ------------------------------------MLTIIKACVGLGAD 14
:||::|:.|..|||
BPUM_0554___y 201 IVEKGSMTLMKHIKWEFDKLPHMLISGGTGGGKTYFILTLVKSLVASGAD 250
BSNT_00839 15 VRILDPKNADLADLEEVLPKKVYSQKNGILMCLRKSVDGMMERMDEMKQM 64
||||||||||||||||||..||:|:||||:|.|||||:.||.||||||..
BPUM_0554___y 251 VRILDPKNADLADLEEVLEGKVFSRKNGIMMTLRKSVEDMMRRMDEMKNH 300
BSNT_00839 65 SNYKTGENYAYLGLKPVFIFFDEYVAFMDLLDMKERNEALSYMKQLVMLG 114
.||:||||||:||.|||||.|||:|||:|:||.|||...:..:||:||||
BPUM_0554___y 301 PNYRTGENYAFLGYKPVFIVFDEFVAFVDMLDFKERESVIQDIKQIVMLG 350
BSNT_00839 115 RQAGYFLVLGAQRPDAKYLADGIRDQFSFRVSLGLMSDTGYGMMFGDVDK 164
||||:|||.|||||||||.||||||||:||:|||.||:|||.|:|||.||
BPUM_0554___y 351 RQAGFFLVAGAQRPDAKYFADGIRDQFNFRISLGKMSETGYAMLFGDTDK 400
BSNT_00839 165 AYVNKKETGRGYANVGTGSVLEFYSPIVPKGYDFMSSIKNALVGVEGAQA 214
.:|.|...|||||..|||:::|||||::|.||||:..|:.| :||
BPUM_0554___y 401 KFVEKDIKGRGYAYAGTGNIMEFYSPLIPNGYDFIEEIRLA----KGA-- 444
BSNT_00839 215 TAVASGSVSDQTASGEGVSEANG 237
BPUM_0554___y 444 ----------------------- 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.