Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01089 and BPUM_0547
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence pep-align/BSNT_01089.1.24716.seq
# -bsequence pep-align/BPUM_0547___yebA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01089-BPUM_0547___yebA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01089-BPUM_0547___yebA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01089
# 2: BPUM_0547___yebA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 388/746 (52.0%)
# Similarity: 516/746 (69.2%)
# Gaps: 21/746 ( 2.8%)
# Score: 2067.0
#
#
#=======================================
BSNT_01089 1 MPHDDHKGSRLSLLLFYFLAFLLLWEWLRPLDSFTETKHTGFFSVFIGLT 50
|.|...:.||..|.::|.:||||||||||||..||||.||.:|.:|||||
BPUM_0547___y 1 MLHTHQRQSRFELFIYYAVAFLLLWEWLRPLQDFTETSHTSYFIIFIGLT 50
BSNT_01089 51 FLLTFFRMRWFVTVPFCVIFTLISIHILFYQGSIFDLSWVSSFLQDVYLN 100
.|.||||::|:||.|.|....|::::::|||. :.|:.::...|:..|
BPUM_0547___y 51 CLFTFFRLKWYVTFPICTGLILLALYLIFYQA---EPSYPAALFADIKDN 97
BSNT_01089 101 ITLIQSGQWNDMIPSFRTLLFFVLLWLLVYLLHYWVIYQRRILFFFLMTV 150
|||:.:|.|:||.||||||||::|||||||||||||:||:||.||.|||:
BPUM_0547___y 98 ITLMSTGMWSDMYPSFRTLLFYILLWLLVYLLHYWVVYQQRIFFFLLMTI 147
BSNT_01089 151 AYITILDTFTPYDATFAVIRIVLIGFFMLGLLYLERIKLMERITLPKTSV 200
.|:||||||||||||||::||::.||.:|||||.:|::..|.|.:.:.:.
BPUM_0547___y 148 VYVTILDTFTPYDATFAIVRIMVFGFCLLGLLYFDRLRSAEGIRVSQKAR 197
BSNT_01089 201 LKWFLPLSVLVLAATVFGLAAPKSEPAWPDPVPFLKKITHQDRVSAGESK 250
||||||:..|||.:...|.:.|||:|.|||||||.|.:|:||. |||::|
BPUM_0547___y 198 LKWFLPMLALVLLSVTLGASLPKSDPKWPDPVPFFKAVTNQDG-SAGQNK 246
BSNT_01089 251 IGYGNHDESLGGPFQQDATPVFTWQGKERTYFRVETKDTYTGKGW--IET 298
:||...|.||||||.:|.||||.|.|||.:|||||||..|||||| ...
BPUM_0547___y 247 VGYSTDDSSLGGPFSEDQTPVFKWSGKEPSYFRVETKSIYTGKGWEDASN 296
BSNT_01089 299 DTGMSYQLSNGKVENLWFDHKVATESRTVRVKVDKHYGYNHLMYPIGAET 348
||..: :|....|.|.||...|.||....||.::.:|.:||.:||||...
BPUM_0547___y 297 DTKPT-RLKEDSVPNRWFTEHVKTEEHETRVDMESNYRFNHAVYPIGTIM 345
BSNT_01089 349 IQPKQAVSLEMNGNTEQISPISEQAGEIRNMGNYTVTYNSPVYKLDELRK 398
:.|...:.|::.|.||:|.|..:... :|:|||.|::.||.:.|::|:|
BPUM_0547___y 346 LMPMDNIPLQIMGKTEKIVPSMQNPP--KNLGNYQVSFLSPTFILEDLQK 393
BSNT_01089 399 VKV-RKNSEEYTFSDRYMQLPDSLPERVRTLAIKLTQDHDNMFDKVKAVE 447
:|| .|..........|:|||.||||||:|||..||:..|||:||.||:|
BPUM_0547___y 394 IKVPTKKQVNQQVGREYLQLPSSLPERVKTLANSLTETKDNMYDKAKAIE 443
BSNT_01089 448 DYLGSNAFTYETENVTIPKNDEDYVDQFLFETKMGYCDNFSSAMVVLLRS 497
|||||..|:|||:||.:|...|||||||||:|.:|||||||::|:|||||
BPUM_0547___y 444 DYLGSAKFSYETQNVAVPSRQEDYVDQFLFDTMIGYCDNFSTSMIVLLRS 493
BSNT_01089 498 AGIPARWVKGYTSGEYKEAGNKNGSIYEVTNNNAHSWVEVYFPEQGWVTF 547
.|||||||||||||:..|......::|||||||||||||||||.:|||||
BPUM_0547___y 494 IGIPARWVKGYTSGQLYETQMDGNNVYEVTNNNAHSWVEVYFPNRGWVTF 543
BSNT_01089 548 EPTKGFTNPAEFTSSDTKDSGSDKSSSPKKAKEKQKEE--KKQPQKEEKQ 595
|||||||||..||: :.:.||::...:|.:::...: :.||.::.:|
BPUM_0547___y 544 EPTKGFTNPETFTN---ESASSDQTDDDQKEEDQPSSDASEDQPTEQPQQ 590
BSNT_01089 596 KEKREPAVSKKPSA----SHTNAGAGLYAALAVLAVLLVAAVLLYVFRSL 641
:|..:||..||.:| :....|:.|..|...:.:|.:.:.:||.||:.
BPUM_0547___y 591 QETAQPAEPKKQTAQAKPNMVQVGSILGFAAGAMILLGLISWMLYRFRAR 640
BSNT_01089 642 WIPVFTVRKLKRRNDQHAFFEAYDALLKQLKRKGLPKRGSETLRDYAKRI 691
|:|.|.|||.||..::..||.||.||||||||:|:.|:...|||::|..|
BPUM_0547___y 641 WLPFFIVRKAKRLPEEEVFFYAYAALLKQLKRRGIEKKPGMTLREFASLI 690
BSNT_01089 692 DEKYDIEDMSKLTLSYERALYRNEDSSALWNDSRELWENLIKRRWS 737
|:|.....|::||..|||||||.||:|.||..|.:||||||.||
BPUM_0547___y 691 DDKDGDHLMTELTQLYERALYRREDASMLWGQSAKLWENLINRR-- 734
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