Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01083 and BPUM_0543
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence pep-align/BSNT_01083___gabP.1.24716.seq
# -bsequence pep-align/BPUM_0543___gabP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01083___gabP-BPUM_0543___gabP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01083___gabP-BPUM_0543___gabP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01083___gabP
# 2: BPUM_0543___gabP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity: 360/476 (75.6%)
# Similarity: 411/476 (86.3%)
# Gaps: 15/476 ( 3.2%)
# Score: 1854.0
#
#
#=======================================
BSNT_01083___ 1 ------MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPG 44
|:...:||:|.|||||::|||||||||||||||||:||||.|||
BPUM_0543___g 1 MFGGKDMSNMTNGLQKNLKTRHISMISIAGVIGAGLFVGSGAVIHSAGPG 50
BSNT_01083___ 45 AVVSYALAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGW 94
:::||:.|||||||||||||||:...||||||||||.|||||||||||||
BPUM_0543___g 51 SILSYSFAGLLVIFIMRMLGEMACAYPTSGSFSQYASDAIGPWAGFTIGW 100
BSNT_01083___ 95 LYWFFWVIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVK 144
||||||||||||||||||.|||||:.|.|:|||||||||:|||||::|||
BPUM_0543___g 101 LYWFFWVIVIAIEAIAGAAIIQYWYGDAPVWLTSLILTILLTLTNIFSVK 150
BSNT_01083___ 145 SFGEFEYWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFF 194
|||||||||||||||:||.||::||||||||. |...||.:||||.|||.
BPUM_0543___g 151 SFGEFEYWFSLIKVVSIILFLLIGFAFIFGFG-GHHTVGLANLTGNGGFL 199
BSNT_01083___ 195 PEGISSVLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRII 244
|.|.||||||||||||||||||||||||||:::|::|||.||||||||||
BPUM_0543___g 200 PNGFSSVLLGIVVVIFSFMGTEIVAIAAGESADPVKSVTTATRSVVWRII 249
BSNT_01083___ 245 VFYVGSIAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAV 294
||||||||:||.|||||||:||.||||||||:||||:|||:||.||||||
BPUM_0543___g 250 VFYVGSIAVVVTLLPWNSASILTSPFVAVLEYIGVPSAAQVMNVIVLTAV 299
BSNT_01083___ 295 LSCLNSGLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYI 344
|||||||||||||||||||||.|||:||||:||:||||.|.|||||||||
BPUM_0543___g 300 LSCLNSGLYTTSRMLYSLAERGEAPKRFMKISKRGVPVAATVAGTFFSYI 349
BSNT_01083___ 345 AVVMNYFSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEAL 394
||:||||.|:|:||||||:|||||||||||||||||:||:|:||.|||.|
BPUM_0543___g 350 AVMMNYFYPETIFLFLVNASGAIALLVYLVIAVSQLRMRRKIEKENPEQL 399
BSNT_01083___ 395 KIKMWLFPFLTYLTILAICGILVSMAFIDSMRDELLLTGVITGIVLISYL 444
||||||||:|||.|||.||.||:||.||:|||.:|:||.:||..||.:|.
BPUM_0543___g 400 KIKMWLFPYLTYFTILVICAILISMLFIESMRPQLILTSIITFSVLAAYF 449
BSNT_01083___ 445 VFRKRKVSEKAAANPVTQ-QQPDILP 469
:|:..| ||.||...: :.|
BPUM_0543___g 450 IFKPNK---KAPANATLENKHP---- 468
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