Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01083 and BPUM_0543

See DNA alignment / Visit BSNT_01083 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence pep-align/BSNT_01083___gabP.1.24716.seq
#    -bsequence pep-align/BPUM_0543___gabP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01083___gabP-BPUM_0543___gabP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01083___gabP-BPUM_0543___gabP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01083___gabP
# 2: BPUM_0543___gabP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity:     360/476 (75.6%)
# Similarity:   411/476 (86.3%)
# Gaps:          15/476 ( 3.2%)
# Score: 1854.0
# 
#
#=======================================

BSNT_01083___      1 ------MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPG     44
                           |:...:||:|.|||||::|||||||||||||||||:||||.|||
BPUM_0543___g      1 MFGGKDMSNMTNGLQKNLKTRHISMISIAGVIGAGLFVGSGAVIHSAGPG     50

BSNT_01083___     45 AVVSYALAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGW     94
                     :::||:.|||||||||||||||:...||||||||||.|||||||||||||
BPUM_0543___g     51 SILSYSFAGLLVIFIMRMLGEMACAYPTSGSFSQYASDAIGPWAGFTIGW    100

BSNT_01083___     95 LYWFFWVIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVK    144
                     ||||||||||||||||||.|||||:.|.|:|||||||||:|||||::|||
BPUM_0543___g    101 LYWFFWVIVIAIEAIAGAAIIQYWYGDAPVWLTSLILTILLTLTNIFSVK    150

BSNT_01083___    145 SFGEFEYWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFF    194
                     |||||||||||||||:||.||::||||||||. |...||.:||||.|||.
BPUM_0543___g    151 SFGEFEYWFSLIKVVSIILFLLIGFAFIFGFG-GHHTVGLANLTGNGGFL    199

BSNT_01083___    195 PEGISSVLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRII    244
                     |.|.||||||||||||||||||||||||||:::|::|||.||||||||||
BPUM_0543___g    200 PNGFSSVLLGIVVVIFSFMGTEIVAIAAGESADPVKSVTTATRSVVWRII    249

BSNT_01083___    245 VFYVGSIAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAV    294
                     ||||||||:||.|||||||:||.||||||||:||||:|||:||.||||||
BPUM_0543___g    250 VFYVGSIAVVVTLLPWNSASILTSPFVAVLEYIGVPSAAQVMNVIVLTAV    299

BSNT_01083___    295 LSCLNSGLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYI    344
                     |||||||||||||||||||||.|||:||||:||:||||.|.|||||||||
BPUM_0543___g    300 LSCLNSGLYTTSRMLYSLAERGEAPKRFMKISKRGVPVAATVAGTFFSYI    349

BSNT_01083___    345 AVVMNYFSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEAL    394
                     ||:||||.|:|:||||||:|||||||||||||||||:||:|:||.|||.|
BPUM_0543___g    350 AVMMNYFYPETIFLFLVNASGAIALLVYLVIAVSQLRMRRKIEKENPEQL    399

BSNT_01083___    395 KIKMWLFPFLTYLTILAICGILVSMAFIDSMRDELLLTGVITGIVLISYL    444
                     ||||||||:|||.|||.||.||:||.||:|||.:|:||.:||..||.:|.
BPUM_0543___g    400 KIKMWLFPYLTYFTILVICAILISMLFIESMRPQLILTSIITFSVLAAYF    449

BSNT_01083___    445 VFRKRKVSEKAAANPVTQ-QQPDILP    469
                     :|:..|   ||.||...: :.|    
BPUM_0543___g    450 IFKPNK---KAPANATLENKHP----    468


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