Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01073 and BPUM_0540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence pep-align/BSNT_01073___ydjN.1.24716.seq
# -bsequence pep-align/BPUM_0540___ydjN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01073___ydjN-BPUM_0540___ydjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01073___ydjN-BPUM_0540___ydjN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01073___ydjN
# 2: BPUM_0540___ydjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity: 148/350 (42.3%)
# Similarity: 218/350 (62.3%)
# Gaps: 3/350 ( 0.9%)
# Score: 723.0
#
#
#=======================================
BSNT_01073___ 1 MKKRIILLLAVIIAAAAAGVAFYVAKDKGHEK-AADVSVNTESGDELLVS 49
|||....::.||..|..|.|.|::.|.....| |..|..|.::.||||||
BPUM_0540___y 1 MKKSTWWIITVIGVAVIAAVIFFLMKPGQEAKHAGKVKTNQDAKDELLVS 50
BSNT_01073___ 50 ITDTDLLTKYYENDKVIHEEKLTSYPAFALDQKQQVLYYTGNNEQNE-MR 98
.||..|...||.:|:.:|.||||:||:.|.|..:|:||||..:|..: :.
BPUM_0540___y 51 FTDQQLNNTYYLHDRALHTEKLTAYPSIAYDSTKQLLYYTYTDEDTQKVS 100
BSNT_01073___ 99 LFKLDLKSNKKTVLYKGAESADSLFLSKDRSTIYFRLGKSDESNFRIAAF 148
:.:|::|.:::..|:...:|.||:.||.|...:|.|..|.....|.:|.|
BPUM_0540___y 101 IRELNVKKDEEKTLFTSHDSIDSMRLSGDGKQLYLRYNKDSGEQFYVAMF 150
BSNT_01073___ 149 DLKTKKYKNLYPAANDQDDTVSSFFYNQKNDSFALLHYSVEEDYKKTDEA 198
|:.|.|.|.||| ...:|||||||.|:..::..|:.|||::|||||||||
BPUM_0540___y 151 DVNTHKVKVLYP-EKSKDDTVSSFAYDPASNHLAIQHYSLKEDYKKTDEA 199
BSNT_01073___ 199 NEKGIDPEPTTIHFAEGRQHKFNELKSLNQFISDIAVSDDDKRILFTSYT 248
||||.||||||:........|..::..::|.|:||:.|.|.|.:::|...
BPUM_0540___y 200 NEKGRDPEPTTMKITLQTGAKGKQIARISQTINDISFSPDHKTLIYTEVK 249
BSNT_01073___ 249 QKGTEQTASIQMLNADTKKYESIISNQKSFKLLIDAQPQFSKDGKNIYFL 298
.:..::.::|:||:.:|.|..:::.|.|...:|..||||||.||.::|||
BPUM_0540___y 250 VRKEKEVSTIKMLDVETGKTTTLVKNSKDVHILSAAQPQFSTDGSSVYFL 299
BSNT_01073___ 299 AEAKGAKKLKDETGREAKVRTIYSYSLENKTFKKVWENPNGIINSFSVIN 348
..||.||:|||:|||:||||||:.|:::.||....||...||:|:|:|..
BPUM_0540___y 300 GVAKNAKELKDDTGRKAKVRTIFEYNIKKKTVDAAWEKDGGIVNNFTVNR 349
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