Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01072 and BPUM_0539

See DNA alignment / Visit BSNT_01072 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence pep-align/BSNT_01072___ydjM.1.24716.seq
#    -bsequence pep-align/BPUM_0539___ydjM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01072___ydjM-BPUM_0539___ydjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01072___ydjM-BPUM_0539___ydjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01072___ydjM
# 2: BPUM_0539___ydjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      88/123 (71.5%)
# Similarity:    98/123 (79.7%)
# Gaps:           1/123 ( 0.8%)
# Score: 465.0
# 
#
#=======================================

BSNT_01072___      1 MLKKVILAAFILVGSTLGAFSFSSDASAKHVNGNITWYNGVGKKGSSGKK     50
                      :.|.::|..:.|.|...|||||..||||.|:|||||||||||||:.|||
BPUM_0539___y      1 -MNKKLIATIVTVASLFLAFSFSHGASAKKVSGNITWYNGVGKKGADGKK     49

BSNT_01072___     51 LGHWDCATKIGFDVPRNGTKIRAYAKAKPKKVITVYKNDVGRMPNAVLDV    100
                     |||||.|||:|||||:.|||:|...||||.|||||||.||||||||||||
BPUM_0539___y     50 LGHWDAATKMGFDVPKKGTKLRVTTKAKPHKVITVYKYDVGRMPNAVLDV     99

BSNT_01072___    101 SPKAFKALGYPLSKGKVAGHYSY    123
                     ||||||||||..|||.|.|||:|
BPUM_0539___y    100 SPKAFKALGYKTSKGVVKGHYTY    122


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