Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01044 and BPUM_0532

See DNA alignment / Visit BSNT_01044 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence pep-align/BSNT_01044___ydiK.1.24716.seq
#    -bsequence pep-align/BPUM_0532___ydiK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01044___ydiK-BPUM_0532___ydiK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01044___ydiK-BPUM_0532___ydiK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01044___ydiK
# 2: BPUM_0532___ydiK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      46/64 (71.9%)
# Similarity:    55/64 (85.9%)
# Gaps:           1/64 ( 1.6%)
# Score: 258.0
# 
#
#=======================================

BSNT_01044___      1 MRNPVVWGMIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFK     50
                     |||||:||:||||||..|||:|..:||.|||||:|||||||||||:|:.|
BPUM_0532___y      1 MRNPVIWGIIYFAVGVAFTYMAIQNPGDMWSFYNILLMVFAAYNINIALK     50

BSNT_01044___     51 MFAFSFKIKKNQK-     63
                     |||||.|:||.|: 
BPUM_0532___y     51 MFAFSVKLKKQQQK     64


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