Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01044 and BPUM_0532
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_01044___ydiK.1.24716.seq
# -bsequence dna-align/BPUM_0532___ydiK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01044___ydiK-BPUM_0532___ydiK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01044___ydiK-BPUM_0532___ydiK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01044___ydiK
# 2: BPUM_0532___ydiK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 146/199 (73.4%)
# Similarity: 146/199 (73.4%)
# Gaps: 11/199 ( 5.5%)
# Score: 499.5
#
#
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BSNT_01044___ 1 ATGAGAAACCCGGTAGTTTGGGGAATGATCTACTTTGCCGTAGG-GTGCA 49
|||||||||||.||..|.|||||.||.||.||.||||||||||| |||
BPUM_0532___y 1 ATGAGAAACCCTGTTATATGGGGCATCATTTATTTTGCCGTAGGTGTG-- 48
BSNT_01044___ 50 TCTTT-ACTTATCTTGCC--GCAAGCTCACCAGGCAGCATGTGGTCATTT 96
.|||| ||.|||.|.||| .|||..| |||||...|||||||||||||
BPUM_0532___y 49 GCTTTCACGTATATGGCCATTCAAAAT--CCAGGTGACATGTGGTCATTT 96
BSNT_01044___ 97 TACTCCATCCTGCTGATGGTGTTCGCCGCTTACAACATCAGCATTTCCTT 146
|||..|||..|||||||||||||.||.||.||.||.||||..||..|..|
BPUM_0532___y 97 TACAACATTTTGCTGATGGTGTTTGCGGCCTATAATATCAATATCGCGCT 146
BSNT_01044___ 147 TAAGATGTTCGCCTTTTCATTTAAAATCAAAA---AGAACCAAAAATAA 192
|||.|||||.|||||.||..|.|||.|||||| ||.|.|||||||||
BPUM_0532___y 147 TAAAATGTTTGCCTTCTCTGTCAAACTCAAAAAACAGCAGCAAAAATAA 195
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