Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01036 and BPUM_0525
See
DNA alignment /
Visit
BSNT_01036 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence pep-align/BSNT_01036___gcp.1.24716.seq
# -bsequence pep-align/BPUM_0525___gcp.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01036___gcp-BPUM_0525___gcp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01036___gcp-BPUM_0525___gcp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01036___gcp
# 2: BPUM_0525___gcp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 269/346 (77.7%)
# Similarity: 304/346 (87.9%)
# Gaps: 4/346 ( 1.2%)
# Score: 1387.0
#
#
#=======================================
BSNT_01036___ 1 MSEQKDMYVLGIETSCDETAAAIVKNGKEIISNVVASQIESHKRFGGVVP 50
||||.|.::||||||||||||:||||||||::||||||||||||||||||
BPUM_0525___g 1 MSEQTDRFILGIETSCDETAASIVKNGKEIVANVVASQIESHKRFGGVVP 50
BSNT_01036___ 51 EIASRHHVEQITLVIEEAFRKAGMTYSDIDAIAVTEGPGLVGALLIGVNA 100
||||||||||:|:|:||...:|.|::.|:|||||||||||||||||||||
BPUM_0525___g 51 EIASRHHVEQVTIVLEEVMTQANMSFQDLDAIAVTEGPGLVGALLIGVNA 100
BSNT_01036___ 101 AKALSFAHNIPLVGVHHIAGHIYANRLVEDIVFPALALVVSGGHTELVYM 150
||||||||.||||||||||||||||:||:::.||.|||||||||||||.|
BPUM_0525___g 101 AKALSFAHQIPLVGVHHIAGHIYANQLVDELQFPCLALVVSGGHTELVLM 150
BSNT_01036___ 151 KEHGSFEVIGETLDDAAGEAYDKVARTMGLPYPGGPQIDKLAEKGNDNIP 200
||||||||||||||||||||||||||||||||||||.||:||.:|...|.
BPUM_0525___g 151 KEHGSFEVIGETLDDAAGEAYDKVARTMGLPYPGGPHIDRLAHEGEPTIK 200
BSNT_01036___ 201 LPRAWLEEGSYNFSFSGLKSAVINTLHNASQKGQEIAPEDLSASFQNSVI 250
|||||||||||:||||||||||||||||||||.:.||||:|:||||.|||
BPUM_0525___g 201 LPRAWLEEGSYHFSFSGLKSAVINTLHNASQKDEIIAPENLAASFQASVI 250
BSNT_01036___ 251 DVLVTKTARAAKEYDVKQVLLAGGVAANRGLRAALEKEFAQHEGITLVIP 300
:|||.||.:||:.|.||||:||||||||:|||.||...|.:...:.:::|
BPUM_0525___g 251 EVLVGKTLKAAEAYGVKQVVLAGGVAANKGLREALTTAFTKLPDVKVIVP 300
BSNT_01036___ 301 PLALCTDNAAMIAAAGTIAFEKGIRGAYDMNGQPGLELTSYQSLTR 346
||:||||||||||||||||||:||||...|||||||.|.||:
BPUM_0525___g 301 PLSLCTDNAAMIAAAGTIAFERGIRGDMAMNGQPGLPLVSYE---- 342
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.