Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01035 and BPUM_0524

See DNA alignment / Visit BSNT_01035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01035___ydiD.1.24716.seq
#    -bsequence pep-align/BPUM_0524___rimI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01035___ydiD-BPUM_0524___rimI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01035___ydiD-BPUM_0524___rimI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01035___ydiD
# 2: BPUM_0524___rimI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:      96/156 (61.5%)
# Similarity:   112/156 (71.8%)
# Gaps:           5/156 ( 3.2%)
# Score: 511.0
# 
#
#=======================================

BSNT_01035___      1 MKTK-----AAVRNMRLEDIDHVYEIEASSFTSPWTKDSFYHELLENPYA     45
                     ||.|     ..:|.|.:.||..||.||..|||:||.|:||.:|:|.|.|:
BPUM_0524___r      1 MKDKNNLNITEIRKMTVADIPEVYTIEVHSFTAPWKKESFVYEILHNQYS     50

BSNT_01035___     46 HYLVIEKDGYLAGYCGIWIVMDDAQITNIAIKPEYRGQSLGETLFRSAVE     95
                     ||.:||:|....||||:||||||||||||||.||:||:..||.|.|..:|
BPUM_0524___r     51 HYFLIEEDEQPVGYCGVWIVMDDAQITNIAILPEHRGKGYGEALLRYVME    100

BSNT_01035___     96 LCKEKDARRLSLEVRVSNHPAQGLYKKFGMQPGGIRKNYYTDNGEDALIM    145
                     .||||....|||||||||.|||.||:|.|.:|..||||||||||||||:|
BPUM_0524___r    101 FCKEKKTDHLSLEVRVSNTPAQSLYEKLGFRPASIRKNYYTDNGEDALVM    150

BSNT_01035___    146 WVTINE    151
                     ||.|||
BPUM_0524___r    151 WVNINE    156


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