Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01031 and BPUM_0522

See DNA alignment / Visit BSNT_01031 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01031___ydiB.1.24716.seq
#    -bsequence pep-align/BPUM_0522___ydiB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01031___ydiB-BPUM_0522___ydiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01031___ydiB-BPUM_0522___ydiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: BPUM_0522___ydiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     102/159 (64.2%)
# Similarity:   118/159 (74.2%)
# Gaps:           5/159 ( 3.1%)
# Score: 535.0
# 
#
#=======================================

BSNT_01031___      1 MKQLKWRTVNPEETKAIAKLAAAFAKPGDVLTLEGDLGAGKTTFTKGFAE     50
                         .|.|...:|||.||...|....|.||||||||||||||||:|||||
BPUM_0522___y      1 ----MWTTKGADETKRIAAALAKLVMPSDVLTLEGDLGAGKTTFSKGFAE     46

BSNT_01031___     51 GLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQ    100
                     |||||||||||||||||||.||.|||||||||||||..||:||:|||.|:
BPUM_0522___y     47 GLGITRIVNSPTFTIIKEYTDGRLPLYHMDVYRMEDAEEDIGLEEYFEGE     96

BSNT_01031___    101 GVCLVEWAHLIEEQLPQERLQI-VIKRAGDDEREITFTAVGNRYEMLCEE    149
                     |||||||||||..|||...|:| :::...::||.:||:|.|.|||.||:|
BPUM_0522___y     97 GVCLVEWAHLIGPQLPSSYLKIEMLRTEREEERHLTFSAKGERYETLCKE    146

BSNT_01031___    150 LSRHDNISN    158
                     :...|:..|
BPUM_0522___y    147 MKEFDHTGN    155


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