Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01030 and BPUM_0521

See DNA alignment / Visit BSNT_01030 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01030___thiL.1.24716.seq
#    -bsequence pep-align/BPUM_0521___thiL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01030___thiL-BPUM_0521___thiL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01030___thiL-BPUM_0521___thiL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01030___thiL
# 2: BPUM_0521___thiL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     184/326 (56.4%)
# Similarity:   240/326 (73.6%)
# Gaps:           2/326 ( 0.6%)
# Score: 984.0
# 
#
#=======================================

BSNT_01030___      1 MDEFDLIHSITPRTIHHSSVDVGIGDDAALYTAKHGVQEIVCVDTMVEDV     50
                     |||||||..|||...|..|:.:||||||::|......:|:||||||||.|
BPUM_0521___t      1 MDEFDLIRRITPTETHQRSLVMGIGDDASVYQPHSHCEEVVCVDTMVEHV     50

BSNT_01030___     51 HFKLHYSSPEDIGYKALAVNISDIAAMGGIPKFYLVSLAVPSKWTASEIK    100
                     ||:..:|:|.:||:||||||:||||||||.||:||||:|:|.....:.:.
BPUM_0521___t     51 HFRFDFSTPFEIGFKALAVNVSDIAAMGGTPKYYLVSIAIPPHGDETVVS    100

BSNT_01030___    101 AMYEGMNELAKLYQMDLIGGDTVSTADKLVVTVTVIGEVEKGRACLRSLA    150
                     |:||||..||..|||||||||||:|....::||||||||.||:||.|..|
BPUM_0521___t    101 ALYEGMKALADTYQMDLIGGDTVATHSDFIITVTVIGEVSKGKACYRHSA    150

BSNT_01030___    151 RPNDVVFVTGEIGSSAAGLSLLLEETNPQNSSVETDYFIHRHKRPEPRVS    200
                     :..|:||||||:||||||||||:.|.: ...:|:|.:|:.|||:|:|.::
BPUM_0521___t    151 QTGDIVFVTGELGSSAAGLSLLMNELD-SPKAVDTAFFLERHKKPQPHIA    199

BSNT_01030___    201 VGRLCSIFKRAALNDVSDGLASELNEIAEASCVSIEIDESMLPIHSDLPK    250
                     .|.:||.:.|.:|||||||||||||||||||.|:||||.:.||||.|||.
BPUM_0521___t    200 AGLICSSYSRVSLNDVSDGLASELNEIAEASHVTIEIDANKLPIHPDLPV    249

BSNT_01030___    251 LHPNWKEWALFGGEDFELTGTVSKEEWEVLKQQCAARQLPITKIGHVREK    300
                     |..:|.||.|||||||.||||:.:.:|:..:.||..:.:.:.:||.|:..
BPUM_0521___t    250 LRKDWLEWVLFGGEDFVLTGTIPQADWDSFEMQCRKKDIQVKRIGQVKGD    299

BSNT_01030___    301 TKSKVILKTDQTSMILEKKGYNHFK-    325
                     ..:.|:||.::...:|.|||||||| 
BPUM_0521___t    300 QAASVLLKDNEQQTMLMKKGYNHFKK    325


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