Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00034 and BPUM_0513

See DNA alignment / Visit BSNT_00034 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:58
# Commandline: needle
#    -asequence pep-align/BSNT_00034___yaaH.1.24716.seq
#    -bsequence pep-align/BPUM_0513___yaaH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00034___yaaH-BPUM_0513___yaaH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00034___yaaH-BPUM_0513___yaaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00034___yaaH
# 2: BPUM_0513___yaaH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity:     307/433 (70.9%)
# Similarity:   351/433 (81.1%)
# Gaps:           6/433 ( 1.4%)
# Score: 1609.0
# 
#
#=======================================

BSNT_00034___      1 ------MVKQGDTLSAIASQYRTTANEIAETNEIPNPDSLVVGQTIVIPI     44
                           :||:||||:.||.:::||.|||..||:|..|:.||:||||||||
BPUM_0513___y      1 MTIQIYVVKRGDTLNEIAMRFKTTVNEIIRTNDIETPNQLVIGQTIVIPI     50

BSNT_00034___     45 AGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPS     94
                     .||||:||:.|||..|.|:|..:..||||||||:...:|.|.|.||||..
BPUM_0513___y     51 RGQFYEVKQNDTLYQIGRRFRISVEELARVNRIRPEAILPIRFLLYIPQR    100

BSNT_00034___     95 PKRDIESNAYLEPRGNQVSENLQQAARESSPYLTYLGAFSFQAQRNGTLV    144
                     |||:|.||||:|||||||||||:|||||:|||||:||||||||||:|||.
BPUM_0513___y    101 PKRNINSNAYIEPRGNQVSENLKQAAREASPYLTHLGAFSFQAQRDGTLK    150

BSNT_00034___    145 APPLTNLRSITESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLN    194
                     .|||..|..|.....|.|.|::|||||..|||||||||||:::||...||
BPUM_0513___y    151 EPPLDQLPQIAAQSRTVLSMVVTNLENDKFSDELGRILLNNQSVKATFLN    200

BSNT_00034___    195 EIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLEISTA    244
                     |||..|::|.|::||||||||||.|:|||.||||||...||:||..||.|
BPUM_0513___y    201 EIVRIAKKYQFKEIHFDFEYLRPADKEAYIQFLREATTRFHQEGWTISVA    250

BSNT_00034___    245 LAPKTSATQQGRWYEAHDYRAHGQIVDFVVLMTYEWGYSGGPPQAVSPIG    294
                     ||||||:.|:|:|||||||.|.|.|||.||||||||||||||.|||||||
BPUM_0513___y    251 LAPKTSSQQKGKWYEAHDYGAIGNIVDHVVLMTYEWGYSGGPAQAVSPIG    300

BSNT_00034___    295 PVRDVIEYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIV    344
                     |||:|||||||.|||||||||||||||||||||..||..|:||||||||.
BPUM_0513___y    301 PVREVIEYALTVMPANKIVMGQNLYGYDWTLPYVQGGPIAKAVSPQQAIA    350

BSNT_00034___    345 IADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKEL    394
                     ||..|||||.||:|||||:||||||.|:.|||||||||||||||||||||
BPUM_0513___y    351 IARNNNASILYDETAQAPYFRYTDANNKEHEVWFEDARSIQAKFNLIKEL    400

BSNT_00034___    395 NLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR    427
                     :|.||:||||||||||||||||||||:.|:|..
BPUM_0513___y    401 SLNGIAYWKLGLSFPQNWLLLSDQFNIEKRTTS    433


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