Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01853 and BPUM_0506

See DNA alignment / Visit BSNT_01853 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01853___yisV.1.24716.seq
#    -bsequence pep-align/BPUM_0506.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01853___yisV-BPUM_0506.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01853___yisV-BPUM_0506.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01853___yisV
# 2: BPUM_0506
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity:     156/511 (30.5%)
# Similarity:   248/511 (48.5%)
# Gaps:          48/511 ( 9.4%)
# Score: 615.5
# 
#
#=======================================

BSNT_01853___      1 MSQWQPSRKSDIPLHRQIEQYMKDKILHGEWAVGTKIPSQRTLADMFQVN     50
                      ......|.||..|..||...:.|.|..|....|.|:|:.|.||....|:
BPUM_0506          1 -MHIDIHRHSDTSLSNQIYFSIIDHIQSGLLQQGDKLPTVRDLAKQLNVS     49

BSNT_01853___     51 RSTVTAAIDELTSQGLLEGRRGGGTKV----------VNSTWSVLAAEPP     90
                     ..|...|...|...|.|...:|.||.|          |.|:.|       
BPUM_0506         50 LVTAAKAYTRLKDDGYLTTVQGKGTFVDELQKQSEIPVPSSTS-------     92

BSNT_01853___     91 LDWS----DYVRSGIHRANSSIIQAINQNEPRADIIRLGTGELSPDLVPA    136
                     .||.    ||:..........:.:|||          |.:..:.|.|:|.
BPUM_0506         93 FDWQLSIPDYLPRSQFAQYHYVEEAIN----------LSSSMIDPGLLPN    132

BSNT_01853___    137 DTIGRMFQQI---NPGALSLGYEQPKGNRQLREAVADHLKGKKIHVSPSA    183
                     ..:.:..|.:   :|..:| .|.:.:|:.|||:.:...|:...:..:|..
BPUM_0506        133 RYLEKEMQHVLARHPQIMS-KYGEIQGDLQLRQVIQSFLEKLDVPSTPEN    181

BSNT_01853___    184 ILIVSGALQALQLISIGLLKRDSVILTEKPSYLQSLHVFQSAGMRLRGLP    233
                     ||:.||:.|.|.|::...:..|.|::.|.|:|..::.||...|.|:..:|
BPUM_0506        182 ILVTSGSQQGLDLVARAFIGPDDVVVMEAPTYPGAIDVFMGRGARIITVP    231

BSNT_01853___    234 MDDEGVKAGLVSSNRKQYGGQLLYTIPSFHNPTGTVMSEQRRKEIISLSK    283
                     :|.||:....:.|...:|..:|:||||:||:|||..||.:|||:::||::
BPUM_0506        232 VDHEGMNMKQLQSICDKYKPKLIYTIPTFHSPTGASMSMKRRKQLLSLAQ    281

BSNT_01853___    284 KEQLPIIEDDAYGDLWFEEKPPQPLKAMDHEGNILYLGTFSKTVSPGLRI    333
                     .....|:|||.|.:|:||:|||.|:|::||:|:::||...|||::||.||
BPUM_0506        282 SIDCLIVEDDPYRELYFEKKPPAPIKSLDHDGHVIYLRGLSKTLAPGCRI    331

BSNT_01853___    334 GWLAGPEPVIERLADIKMQTDYGSSGLSQWAAAEWLSQGYYEEHLTWVRR    383
                     |.:.....:..||...|...|.||..|:|.|...:|:.....:|...:|.
BPUM_0506        332 GIITASGSIFNRLLAAKANNDLGSPLLTQKAILPFLTSKKMIDHTKKLRT    381

BSNT_01853___    384 KLKERRDAAVHFLERYAGDIATWRIPAGGFYIWVTFHKNLPVSRFFYGLL    433
                     .|..|||..:..|.::|....||:||.||..:|::|...:......:...
BPUM_0506        382 ALMVRRDLMIDVLSKHAPKDVTWQIPQGGLNLWLSFPSWVDTRALLHEAR    431

BSNT_01853___    434 KRQVLVNPGYI-YDGEDR-NSIRLSYSYASLGDLETGIKAAAETARRLMM    481
                     |:|:...||.: |.||.: |.||||:||.:...|..|::......::.:.
BPUM_0506        432 KQQITFLPGSVCYPGEPKQNYIRLSFSYVNEKALIEGVEKLCGIFQQALS    481

BSNT_01853___    482 S----------    482
                     :          
BPUM_0506        482 TPQNHKQSLFF    492


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