Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01853 and BPUM_0506
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence pep-align/BSNT_01853___yisV.1.24716.seq
# -bsequence pep-align/BPUM_0506.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01853___yisV-BPUM_0506.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01853___yisV-BPUM_0506.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01853___yisV
# 2: BPUM_0506
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 156/511 (30.5%)
# Similarity: 248/511 (48.5%)
# Gaps: 48/511 ( 9.4%)
# Score: 615.5
#
#
#=======================================
BSNT_01853___ 1 MSQWQPSRKSDIPLHRQIEQYMKDKILHGEWAVGTKIPSQRTLADMFQVN 50
......|.||..|..||...:.|.|..|....|.|:|:.|.||....|:
BPUM_0506 1 -MHIDIHRHSDTSLSNQIYFSIIDHIQSGLLQQGDKLPTVRDLAKQLNVS 49
BSNT_01853___ 51 RSTVTAAIDELTSQGLLEGRRGGGTKV----------VNSTWSVLAAEPP 90
..|...|...|...|.|...:|.||.| |.|:.|
BPUM_0506 50 LVTAAKAYTRLKDDGYLTTVQGKGTFVDELQKQSEIPVPSSTS------- 92
BSNT_01853___ 91 LDWS----DYVRSGIHRANSSIIQAINQNEPRADIIRLGTGELSPDLVPA 136
.||. ||:..........:.:||| |.:..:.|.|:|.
BPUM_0506 93 FDWQLSIPDYLPRSQFAQYHYVEEAIN----------LSSSMIDPGLLPN 132
BSNT_01853___ 137 DTIGRMFQQI---NPGALSLGYEQPKGNRQLREAVADHLKGKKIHVSPSA 183
..:.:..|.: :|..:| .|.:.:|:.|||:.:...|:...:..:|..
BPUM_0506 133 RYLEKEMQHVLARHPQIMS-KYGEIQGDLQLRQVIQSFLEKLDVPSTPEN 181
BSNT_01853___ 184 ILIVSGALQALQLISIGLLKRDSVILTEKPSYLQSLHVFQSAGMRLRGLP 233
||:.||:.|.|.|::...:..|.|::.|.|:|..::.||...|.|:..:|
BPUM_0506 182 ILVTSGSQQGLDLVARAFIGPDDVVVMEAPTYPGAIDVFMGRGARIITVP 231
BSNT_01853___ 234 MDDEGVKAGLVSSNRKQYGGQLLYTIPSFHNPTGTVMSEQRRKEIISLSK 283
:|.||:....:.|...:|..:|:||||:||:|||..||.:|||:::||::
BPUM_0506 232 VDHEGMNMKQLQSICDKYKPKLIYTIPTFHSPTGASMSMKRRKQLLSLAQ 281
BSNT_01853___ 284 KEQLPIIEDDAYGDLWFEEKPPQPLKAMDHEGNILYLGTFSKTVSPGLRI 333
.....|:|||.|.:|:||:|||.|:|::||:|:::||...|||::||.||
BPUM_0506 282 SIDCLIVEDDPYRELYFEKKPPAPIKSLDHDGHVIYLRGLSKTLAPGCRI 331
BSNT_01853___ 334 GWLAGPEPVIERLADIKMQTDYGSSGLSQWAAAEWLSQGYYEEHLTWVRR 383
|.:.....:..||...|...|.||..|:|.|...:|:.....:|...:|.
BPUM_0506 332 GIITASGSIFNRLLAAKANNDLGSPLLTQKAILPFLTSKKMIDHTKKLRT 381
BSNT_01853___ 384 KLKERRDAAVHFLERYAGDIATWRIPAGGFYIWVTFHKNLPVSRFFYGLL 433
.|..|||..:..|.::|....||:||.||..:|::|...:......:...
BPUM_0506 382 ALMVRRDLMIDVLSKHAPKDVTWQIPQGGLNLWLSFPSWVDTRALLHEAR 431
BSNT_01853___ 434 KRQVLVNPGYI-YDGEDR-NSIRLSYSYASLGDLETGIKAAAETARRLMM 481
|:|:...||.: |.||.: |.||||:||.:...|..|::......::.:.
BPUM_0506 432 KQQITFLPGSVCYPGEPKQNYIRLSFSYVNEKALIEGVEKLCGIFQQALS 481
BSNT_01853___ 482 S---------- 482
:
BPUM_0506 482 TPQNHKQSLFF 492
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