Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00887 and BPUM_0500

See DNA alignment / Visit BSNT_00887 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:37
# Commandline: needle
#    -asequence pep-align/BSNT_00887.1.24716.seq
#    -bsequence pep-align/BPUM_0500.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00887-BPUM_0500.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00887-BPUM_0500.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00887
# 2: BPUM_0500
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     163/295 (55.3%)
# Similarity:   216/295 (73.2%)
# Gaps:          12/295 ( 4.1%)
# Score: 822.0
# 
#
#=======================================

BSNT_00887         1 MKNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPFELVWIRYVIAILALL     50
                     |....:|::|||:||||||||||||||.|||:||.||||:||.||.:.|:
BPUM_0500          1 MNEKYIGALYLAIAASIWGGMYVVVKVTVAVVPPLELVWMRYAIAGIVLV     50

BSNT_00887        51 IVGLIRKQSWKIHKRDLLLIVAIGIVGNTISIVTQEYGTMLSSAQMGAII    100
                     ........|:::.|:|:.|:|.||::||.:||||||.|||.:||||||:|
BPUM_0500         51 FTIWRLGYSFQLDKKDIPLMVLIGLIGNFLSIVTQEIGTMYTSAQMGAVI    100

BSNT_00887       101 TSSTPAFMVIFARLLLKEPLNIKKGTSIILATTGVLFIVGNGHIDTSNQL    150
                     ||:||||||:||..||||.:.::|..||:|||.||..::|...:.|...:
BPUM_0500        101 TSATPAFMVLFAFFLLKEAMTVRKCASILLATAGVWLMIGPVAVQTDEFV    150

BSNT_00887       151 GGISLLVAALTWALMSVLIKRVPNSYSPILVTTYSTFVAIVALTPFVKPS    200
                     ||:||:.|||||||||||:||||..|..::.|||:..:|.:.|||.|   
BPUM_0500        151 GGLSLVFAALTWALMSVLLKRVPGKYPQVVTTTYAIIIAFIVLTPPV---    197

BSNT_00887       201 TIFTPLLLD------PKILGGLLYLGIVSTACAFLLWNRGLQLLNASSGG    244
                      :|....||      |:|.||:|||||:|||.||.||||||||::|||||
BPUM_0500        198 -LFRLPHLDVEQMARPEIWGGILYLGIISTALAFFLWNRGLQLMDASSGG    246

BSNT_00887       245 LFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVIKE--    287
                     |||||||:||.:|||:||||::|...:||...|.:||..|:::  
BPUM_0500        247 LFFFFQPIVGAILGWLLLGEEMGLRSFIGILCIFAGVYTVLRQKE    291


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