Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03899 and BPUM_0495

See DNA alignment / Visit BSNT_03899 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_03899___yrpG.1.24716.seq
#    -bsequence pep-align/BPUM_0495.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03899___yrpG-BPUM_0495.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03899___yrpG-BPUM_0495.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03899___yrpG
# 2: BPUM_0495
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:     100/349 (28.7%)
# Similarity:   140/349 (40.1%)
# Gaps:         110/349 (31.5%)
# Score: 372.5
# 
#
#=======================================

BSNT_03899___      1 MEYTYLGRTGLRVSRLCLGT-MNFGVDTDEKTAFRIMDEALDNGIQFFDT     49
                     |:|:.||.:||.:|:|..|. :|.|...:|:||...:..|||.||..|||
BPUM_0495          1 MKYSKLGNSGLTISKLAYGNWINHGGKINEETAHDCVKAALDVGITTFDT     50

BSNT_03899___     50 ANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPKDGPND     99
                     |::|...|    .|.|:|:  :..|.|||.:.|.|||..|..   .|.||
BPUM_0495         51 ADVYSDTK----AEEILGR--SLKGIRRESIELCTKVCHPTG---TGKND     91

BSNT_03899___    100 MRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQV    149
                      ||||...|..:...||:|||||:|::|..|..|..||.:|...||...|
BPUM_0495         92 -RGLSRKHIMENCHASLQRLQTDYIDIYYAHRFDPTTPLEETMLAFADLV    140

BSNT_03899___    150 RSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEME    199
                     |.|||:|||.|.:....:.:....|.:.. :.|:..|.:||:|.|..|.:
BPUM_0495        141 RQGKVNYIGVSEWTAEQITRGAVLARELN-VPLIASQPQYSMLWRIIESD    189

BSNT_03899___    200 VLPAARDLGLGVVAWSPLAGGLLGGKALKSNAGIRTAKRA----------    239
                     |:|..:..|||.|.|||||.|:|.||.|...: :.|..||          
BPUM_0495        190 VIPTCQREGLGQVVWSPLAQGILTGKYLPGKS-LPTNSRANSTAGKPFFK    238

BSNT_03899___    240 ------------DLIEKHRLQLEKFSDLCKELGEKEANVALAWVLANPVL    277
                                 :.|:|.:|...:                          
BPUM_0495        239 NLAQRWMNNNTLEAIQKLKLVASE--------------------------    262

BSNT_03899___    278 TAPIIGPRTVEQLRDTIKAVEISLDKEVLRMLNDIFPGPGGETPEAYAW    326
                                                                      
BPUM_0495        262 -------------------------------------------------    262


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