Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05687 and BPUM_0485
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence pep-align/BSNT_05687___ywjB.1.24716.seq
# -bsequence pep-align/BPUM_0485.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05687___ywjB-BPUM_0485.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05687___ywjB-BPUM_0485.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05687___ywjB
# 2: BPUM_0485
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 76/182 (41.8%)
# Similarity: 111/182 (61.0%)
# Gaps: 10/182 ( 5.5%)
# Score: 400.5
#
#
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BSNT_05687___ 1 --MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTV 48
.:||.:.|.|:|:||.:|:||..:|||...|||.|..|.|||.:|||:
BPUM_0485 1 MSQQRKLLFYGAMSIDGYLAREDHRLDWLIGTEGEEDTNYDDFYASVDTL 50
BSNT_05687___ 49 ILGRGTYEHVKVLTP-VFPYQDKTCYVFTGS-PDSYQDEHVTFINEGARA 96
|:||.|||.|..|:| .|||:.||||:.:.: .||.:..|: |.|...:
BPUM_0485 51 IMGRNTYEQVLQLSPDEFPYEGKTCYIMSRTLQDSLKGTHI--IREDILS 98
BSNT_05687___ 97 FTARLKQEKGSNIWIAGGAELVNDFMKEDAIDEFIITVIPVVLGSGIPLF 146
|..:||.|.|.:|||.||.||:..|:|...:||..:.::||::|.|||||
BPUM_0485 99 FVRKLKNETGQHIWIVGGGELLQSFIKAGLVDELYLQIVPVMIGRGIPLF 148
BSNT_05687___ 147 HELTNETKLRLKGTKQFGQAVQLHYVRA---- 174
..:..|.|..||..:|:.|..::|::..
BPUM_0485 149 SPVDMEAKFSLKEVRQYKQIAEMHFILKQEDH 180
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