Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00478 and BPUM_0470

See DNA alignment / Visit BSNT_00478 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence pep-align/BSNT_00478___yccC.1.24716.seq
#    -bsequence pep-align/BPUM_0470___yccC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00478___yccC-BPUM_0470___yccC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00478___yccC-BPUM_0470___yccC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00478___yccC
# 2: BPUM_0470___yccC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity:     227/387 (58.7%)
# Similarity:   292/387 (75.5%)
# Gaps:          17/387 ( 4.4%)
# Score: 1152.0
# 
#
#=======================================

BSNT_00478___      1 --MKKQRMLVLFTALLFVFTGCSHSPETKESPKEKTQTQKVSSASASE--     46
                       :.|....||.:.||.:...|:::     |.:||.|.:..::::.|:  
BPUM_0470___y      1 MNVTKWLGAVLLSVLLLLTAACANT-----STQEKNQNENETASNESKDK     45

BSNT_00478___     47 -------KKDLPNTRILATGGTIAGADQSKTSTTEYKAGVVGVESLIEAV     89
                            .|.|.|.::|||||||||:..|.|.||.||:|.:|::.:|.:|
BPUM_0470___y     46 TTAVETGNKSLSNIKVLATGGTIAGSSDSDTDTTGYKSGALGIDKVIASV     95

BSNT_00478___     90 PEMKDIANVSGEQIVNVGSTNIDNKILLKLAKRINHLLASDDVDGIVVTH    139
                     |::||||||:|||:.||||.|:|:.:|||||||:|.||..|.|||||:||
BPUM_0470___y     96 PQLKDIANVTGEQVANVGSENVDDALLLKLAKRVNKLLNDDQVDGIVITH    145

BSNT_00478___    140 GTDTLEETAYFLNLTVKSDKPVVIVGSMRPSTAISADGPSNLYNAVKVAG    189
                     ||||||||||||||.||||||||:||||||::|||||||.|||:|||:|.
BPUM_0470___y    146 GTDTLEETAYFLNLVVKSDKPVVVVGSMRPASAISADGPLNLYHAVKIAS    195

BSNT_00478___    190 APEAKGKGTLVVLNDRIASARYVTKTNTTTTDTFKSDEMGFVGTIADDIY    239
                     ...|||||.:|.|||||||||::|||||||||:|||.|.|::|.||.::.
BPUM_0470___y    196 TKAAKGKGVMVTLNDRIASARFITKTNTTTTDSFKSLEHGYIGEIAGEVV    245

BSNT_00478___    240 -FNNEITRKHTKDTDFSVSNLDELPQVDIIYGYQNDGSYLFDAAVKAGAK    288
                      |.||.|||||.:::|.|||:.|||||||:||||||..|::|||||||||
BPUM_0470___y    246 SFYNEPTRKHTSESEFDVSNIKELPQVDILYGYQNDQKYMYDAAVKAGAK    295

BSNT_00478___    289 GIVFAGSGNGSLSDAAEKGADSAVKKGVTVVRSTRTGNGVVTPNQDYAEK    338
                     |||.|.:|||::|..|.|||..||||.|.||||:|.|||:||..:...|.
BPUM_0470___y    296 GIVVAAAGNGTMSTEAIKGATDAVKKDVVVVRSSRAGNGIVTHEKMDDEH    345

BSNT_00478___    339 DLLASNSLNPQKARMLLMLALTKTNDPQKIQAYFNEY    375
                     ..::|:||||||||:|||||||||.||.|:|.::.:|
BPUM_0470___y    346 HFVSSDSLNPQKARILLMLALTKTKDPSKVQTFYEKY    382


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