Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00478 and BPUM_0470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence pep-align/BSNT_00478___yccC.1.24716.seq
# -bsequence pep-align/BPUM_0470___yccC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00478___yccC-BPUM_0470___yccC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00478___yccC-BPUM_0470___yccC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00478___yccC
# 2: BPUM_0470___yccC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 227/387 (58.7%)
# Similarity: 292/387 (75.5%)
# Gaps: 17/387 ( 4.4%)
# Score: 1152.0
#
#
#=======================================
BSNT_00478___ 1 --MKKQRMLVLFTALLFVFTGCSHSPETKESPKEKTQTQKVSSASASE-- 46
:.|....||.:.||.:...|::: |.:||.|.:..::::.|:
BPUM_0470___y 1 MNVTKWLGAVLLSVLLLLTAACANT-----STQEKNQNENETASNESKDK 45
BSNT_00478___ 47 -------KKDLPNTRILATGGTIAGADQSKTSTTEYKAGVVGVESLIEAV 89
.|.|.|.::|||||||||:..|.|.||.||:|.:|::.:|.:|
BPUM_0470___y 46 TTAVETGNKSLSNIKVLATGGTIAGSSDSDTDTTGYKSGALGIDKVIASV 95
BSNT_00478___ 90 PEMKDIANVSGEQIVNVGSTNIDNKILLKLAKRINHLLASDDVDGIVVTH 139
|::||||||:|||:.||||.|:|:.:|||||||:|.||..|.|||||:||
BPUM_0470___y 96 PQLKDIANVTGEQVANVGSENVDDALLLKLAKRVNKLLNDDQVDGIVITH 145
BSNT_00478___ 140 GTDTLEETAYFLNLTVKSDKPVVIVGSMRPSTAISADGPSNLYNAVKVAG 189
||||||||||||||.||||||||:||||||::|||||||.|||:|||:|.
BPUM_0470___y 146 GTDTLEETAYFLNLVVKSDKPVVVVGSMRPASAISADGPLNLYHAVKIAS 195
BSNT_00478___ 190 APEAKGKGTLVVLNDRIASARYVTKTNTTTTDTFKSDEMGFVGTIADDIY 239
...|||||.:|.|||||||||::|||||||||:|||.|.|::|.||.::.
BPUM_0470___y 196 TKAAKGKGVMVTLNDRIASARFITKTNTTTTDSFKSLEHGYIGEIAGEVV 245
BSNT_00478___ 240 -FNNEITRKHTKDTDFSVSNLDELPQVDIIYGYQNDGSYLFDAAVKAGAK 288
|.||.|||||.:::|.|||:.|||||||:||||||..|::|||||||||
BPUM_0470___y 246 SFYNEPTRKHTSESEFDVSNIKELPQVDILYGYQNDQKYMYDAAVKAGAK 295
BSNT_00478___ 289 GIVFAGSGNGSLSDAAEKGADSAVKKGVTVVRSTRTGNGVVTPNQDYAEK 338
|||.|.:|||::|..|.|||..||||.|.||||:|.|||:||..:...|.
BPUM_0470___y 296 GIVVAAAGNGTMSTEAIKGATDAVKKDVVVVRSSRAGNGIVTHEKMDDEH 345
BSNT_00478___ 339 DLLASNSLNPQKARMLLMLALTKTNDPQKIQAYFNEY 375
..::|:||||||||:|||||||||.||.|:|.::.:|
BPUM_0470___y 346 HFVSSDSLNPQKARILLMLALTKTKDPSKVQTFYEKY 382
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