Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00474 and BPUM_0465
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence pep-align/BSNT_00474___lmrB.1.24716.seq
# -bsequence pep-align/BPUM_0465___lmrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00474___lmrB-BPUM_0465___lmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00474___lmrB-BPUM_0465___lmrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00474___lmrB
# 2: BPUM_0465___lmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity: 307/480 (64.0%)
# Similarity: 388/480 (80.8%)
# Gaps: 4/480 ( 0.8%)
# Score: 1661.0
#
#
#=======================================
BSNT_00474___ 1 METTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLMKELNITAA 50
|.....|:...:.:||:||.:.|||||:|||||||:||..|..:..|.|.
BPUM_0465___l 1 MNKQQAANSHIRTLPIIISFITAGFIGLFSETALNMALRSLTLDFGIEAT 50
BSNT_00474___ 51 TVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFSILGTFIAALA 100
|.|||||||||.||||||:|||:||||||||||..||:|||:||||||:|
BPUM_0465___l 51 TAQWLTTGYLLTLGILVPISGLILQWFTTRQLFMTSLVFSIIGTFIAAVA 100
BSNT_00474___ 101 PSFSFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMF 150
|.||.|:.||:|||:||.|||||||||||||.||||||.:||.|||||||
BPUM_0465___l 101 PVFSILMVARVVQAVGTALLLPLMFNTILVIIPPHKRGRSMGIIGLVIMF 150
BSNT_00474___ 151 APAIGPTFSGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNVSETTKPK 200
|||:|||.|||:|:.|.||||||||||.|:.|||||..:|||::|.|:||
BPUM_0465___l 151 APAVGPTVSGLILKSLTWHWIFWISLPLLIAALVFGFIFMQNITEPTRPK 200
BSNT_00474___ 201 IDVLSIILSTIGFGGIVFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFS 250
||:|||:||||||||||:|||:|||| |||.|..|||:::|||:|:::||
BPUM_0465___l 201 IDILSIVLSTIGFGGIVYGFSSAGEG-GGWGSMHVIVAIVVGVIGILVFS 249
BSNT_00474___ 251 IRQLTMKQPMMNLRAFKYPMFILGVIMVFICMMVILSSMLLLPMYLQGGL 300
:|||.||:||:||..||||||::|::::.:||||:||:|::||:|||..|
BPUM_0465___l 250 LRQLNMKEPMLNLSPFKYPMFVIGLLLILVCMMVMLSAMMILPLYLQTSL 299
BSNT_00474___ 301 VLTAFASGLVLLPGGILNGFMSPVTGRLFDKYGPKWLVIPGFVIVTVVLW 350
.||.|.:||:||||||:||.:||:.|.||||:|||||||||..||...:.
BPUM_0465___l 300 ALTTFTAGLMLLPGGIINGLLSPIMGGLFDKFGPKWLVIPGLAIVAATML 349
BSNT_00474___ 351 FFSNVTTASTAVLIIILHTCLMIGISMIMMPAQTNGLNQLPREFYPDGTA 400
.|:|::..::...|:.||..||:||:|||||||||||||||.|.||.|||
BPUM_0465___l 350 GFTNLSVNTSIGYIVTLHITLMVGIAMIMMPAQTNGLNQLPPELYPHGTA 399
BSNT_00474___ 401 IMNTLQQMAGAIGTAVAVSIMAAGQHDYMSTVKNPADPAVIPQALTAGVQ 450
|||||||::|||||||.:||:::|...:|..|.:||:|.....|.|.|||
BPUM_0465___l 400 IMNTLQQVSGAIGTAVGISILSSGTRSFMENVADPANPMNQLLAFTNGVQ 449
BSNT_00474___ 451 HAFVFAMIVAIIGLIGAFFMKRVKVDH--- 477
|||:||:|:.:||||.|||:|||||:.
BPUM_0465___l 450 HAFIFAVIMTVIGLIIAFFIKRVKVEQQVS 479
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