Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01347 and BPUM_0453
See
DNA alignment /
Visit
BSNT_01347 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence pep-align/BSNT_01347___acoC.1.24716.seq
# -bsequence pep-align/BPUM_0453___acoC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01347___acoC-BPUM_0453___acoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01347___acoC-BPUM_0453___acoC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01347___acoC
# 2: BPUM_0453___acoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 245/401 (61.1%)
# Similarity: 303/401 (75.6%)
# Gaps: 25/401 ( 6.2%)
# Score: 1228.0
#
#
#=======================================
BSNT_01347___ 1 MAVKVVMPKLGMAMKQGEVSIWNKKVGDPVEKGESIASIQSEKIEMEIEA 50
|||:||||||||:||:|.||:|||:||:.|.||||||||.|||||||||:
BPUM_0453___a 1 MAVEVVMPKLGMSMKEGTVSVWNKEVGETVNKGESIASINSEKIEMEIES 50
BSNT_01347___ 51 PEKGTLIDIKVKEGEEVPPGTAICYIGDANESVQEEASAPVAEDNMPQAV 100
|.:||::||||.|||.|||||.|||||:.||.|:|:
BPUM_0453___a 51 PAEGTILDIKVPEGEGVPPGTVICYIGEGNEQVEEK-------------- 86
BSNT_01347___ 101 QPVKQENKPAASKKDRMKISPVARKIAEKAGLDLKQLKGTGPGGRIVKDD 150
|::..|...||:|:||||||||||:.|.||:..|.||||.|||.|.|
BPUM_0453___a 87 ---KEKGLPPKQKKERIKISPVARKIAQSANLDIHTLVGTGPDGRITKAD 133
BSNT_01347___ 151 VTKALAEQK---KDQAKPVSEQKAQEIPVTGMRKVIAARMQESLANSAQL 197
|.:||.::| |.|.:|...| ||:.|||.||:||.|||..||||
BPUM_0453___a 134 VLRALPDEKEKQKQQNEPTKHQ-----PVSMMRKTIASRMMESLQTSAQL 178
BSNT_01347___ 198 TITMKADITKLATLQKQLSPTAEERYGTKLTITHFVSRAAVLALQAHPVL 247
|||||||:|||..||:||:.||..||.||||||.|:::||:|:|..||.:
BPUM_0453___a 179 TITMKADVTKLTNLQQQLNETAIARYETKLTITDFIAKAAILSLLEHPAM 228
BSNT_01347___ 248 NSFYQNERIITHPHVHLGMAVALENGLVVPVIRHAEKLSLIELAQSISEN 297
||.|.|..:.|..:||||:|.||:|||.||||:|||:|:|||||:||...
BPUM_0453___a 229 NSQYHNGVVETFENVHLGIAAALDNGLAVPVIQHAERLTLIELAKSIKLY 278
BSNT_01347___ 298 AKKAREGRAGSEELQGSTFSITNLGAFGVEHFTPILNPPETGILGIGASY 347
.||||||:...:|::||||:||||||:|||||||||||||.||||||..|
BPUM_0453___a 279 GKKAREGKLLHDEIRGSTFTITNLGAYGVEHFTPILNPPEAGILGIGTMY 328
BSNT_01347___ 348 DTPVYQGEEIVRSTILPLSLTFDHRACDGAPAAAFLKAMKTYLEEPAALI 397
|||||:.:|:.:.||||||||||||..|||||:|||..:|.:||||.:::
BPUM_0453___a 329 DTPVYREDELCKGTILPLSLTFDHRVLDGAPASAFLSTVKAHLEEPISIL 378
BSNT_01347___ 398 L 398
|
BPUM_0453___a 379 L 379
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.