Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00804 and BPUM_0446

See DNA alignment / Visit BSNT_00804 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence pep-align/BSNT_00804___sigB.1.24716.seq
#    -bsequence pep-align/BPUM_0446___sigB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00804___sigB-BPUM_0446___sigB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00804___sigB-BPUM_0446___sigB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: BPUM_0446___sigB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     230/262 (87.8%)
# Similarity:   249/262 (95.0%)
# Gaps:           0/262 ( 0.0%)
# Score: 1169.0
# 
#
#=======================================

BSNT_00804___      1 MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYS     50
                     |||||||.|||||||||||..||:.||||||.|||..|||||||||||||
BPUM_0446___s      1 MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYS     50

BSNT_00804___     51 KGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRD    100
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
BPUM_0446___s     51 KGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRD    100

BSNT_00804___    101 KTWSVHVPRRIKELGPRIKMAVDQLTTETQRSPKVEEIAEFLDVSEEEVL    150
                     |||||||||||||||||||||||.||||||:||||:||||:|||:|||||
BPUM_0446___s    101 KTWSVHVPRRIKELGPRIKMAVDHLTTETQKSPKVQEIAEYLDVTEEEVL    150

BSNT_00804___    151 ETMEMGKSYQALSVDHSIEADSDGSTVTILDIVGSQEDGYERVNQQLMLQ    200
                     |||||||||||||||..:||||:||||||||:|||||:|||||||::||:
BPUM_0446___s    151 ETMEMGKSYQALSVDQGVEADSEGSTVTILDVVGSQEEGYERVNQKMMLE    200

BSNT_00804___    201 SVLHVLSDREKQIIDLTYIQNKSQKETGDILGISQMHVSRLQRKAVKKLR    250
                     ||||||:||||:||:|||:||||||||||:||||||||||||||||||||
BPUM_0446___s    201 SVLHVLTDREKEIINLTYLQNKSQKETGDLLGISQMHVSRLQRKAVKKLR    250

BSNT_00804___    251 EALIEDPSMELM    262
                     :||.||.||||.
BPUM_0446___s    251 DALSEDASMELG    262


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