Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00804 and BPUM_0446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00804___sigB.1.24716.seq
# -bsequence dna-align/BPUM_0446___sigB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00804___sigB-BPUM_0446___sigB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00804___sigB-BPUM_0446___sigB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: BPUM_0446___sigB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 794
# Identity: 611/794 (77.0%)
# Similarity: 611/794 (77.0%)
# Gaps: 10/794 ( 1.3%)
# Score: 2301.0
#
#
#=======================================
BSNT_00804___ 1 ATGACACAACCATCAAAAACTACGAAACTAACTAAAGATGAAGTCGATCG 50
||||||||||||||.|||||||.|||||||||||||||||||||.|||||
BPUM_0446___s 1 ATGACACAACCATCCAAAACTATGAAACTAACTAAAGATGAAGTGGATCG 50
BSNT_00804___ 51 GCTCAT---AAGCGATTACCAAACAAAGCAAGATGAACAAGCGCAGGAAA 97
.||.|| |||| ||.|||.|.||.||||||||.||.||||||...|
BPUM_0446___s 51 CCTTATCCAAAGC---TATCAATCCAATCAAGATGAGCAGGCGCAGCTCA 97
BSNT_00804___ 98 CGCTTGTGCGGGTG-TACACAAATCTGGTTGACATGCTTGCGAAAAAATA 146
||||.|| ||..|| ||.|||||..||||.||.|||||.||.||||||||
BPUM_0446___s 98 CGCTGGT-CGAATGCTATACAAACTTGGTCGATATGCTGGCAAAAAAATA 146
BSNT_00804___ 147 CTCAAAAGGCAAAAGCTTCCACGAGGATCTCCGCCAGGTCGGCATGATCG 196
.||||||||.||||||||.||.|||||||||.|.||.||.||.|||||.|
BPUM_0446___s 147 TTCAAAAGGAAAAAGCTTTCATGAGGATCTCAGACAAGTTGGAATGATTG 196
BSNT_00804___ 197 GGCTGCTAGGCGCGATTAAGCGATACGATCCTGTTGTCGGCAAATCGTTT 246
|..|.||.|||||.|||||||||||.|||||..|.|||||.|||||.|||
BPUM_0446___s 197 GTTTACTTGGCGCCATTAAGCGATATGATCCGCTCGTCGGTAAATCATTT 246
BSNT_00804___ 247 GAAGCTTTTGCAATCCCGACAATCATCGGTGAAATTAAACGTTTCCTCAG 296
|||||.|||||.||.||.||.||.|||||.|||||.|||||.||..|..|
BPUM_0446___s 247 GAAGCCTTTGCTATTCCAACCATTATCGGGGAAATCAAACGCTTTTTACG 296
BSNT_00804___ 297 AGATAAAACATGGAGCGTTCATGTGCCGAGACGAATTAAAGAACTGGGTC 346
.||||||||||||||.||.|||||.||.||.|||||.|||||.||.||.|
BPUM_0446___s 297 GGATAAAACATGGAGTGTCCATGTACCAAGGCGAATCAAAGAGCTTGGAC 346
BSNT_00804___ 347 CAAGAATCAAAATGGCGGTTGATCAGCTGACCACTGAAACACAAAGATCG 396
||||||||||.|||||.||||||||.||.||.||.||.||.||||..||.
BPUM_0446___s 347 CAAGAATCAAGATGGCCGTTGATCATCTAACAACAGAGACGCAAAAGTCA 396
BSNT_00804___ 397 CCGAAAGTCGAAGAGATTGCCGAATTCCTCGATGTTTCTGAAGAAGAGGT 446
|||||||||.||||||||||.||||.|||.|||||..|.||.|||||.||
BPUM_0446___s 397 CCGAAAGTCCAAGAGATTGCAGAATACCTAGATGTGACAGAGGAAGAAGT 446
BSNT_00804___ 447 TCTTGAAACGATGGAAATGGGCAAAAGCTATCAAGCCTTATCCGTTGACC 496
|||.|||||.|||||.||||||||||||||||||||..|.||.|||||||
BPUM_0446___s 447 TCTGGAAACCATGGAGATGGGCAAAAGCTATCAAGCACTGTCTGTTGACC 496
BSNT_00804___ 497 ACAGCATTGAAGCGGATTCGGACGGAAGCACCGTCACGATTCTTGATATC 546
|..||.|.||.||.|||||.||.|||||.||.|||||.|||.|.||..|.
BPUM_0446___s 497 AAGGCGTAGAGGCTGATTCTGAAGGAAGTACAGTCACCATTTTAGACGTT 546
BSNT_00804___ 547 GTCGGATCACAGGAGGACGGATATGAGCGGGTTAACCAGCAATTGATGCT 596
|||||.|||||.||.||.||.||.|||||.||.|||||..||.|||||||
BPUM_0446___s 547 GTCGGCTCACAAGAAGAGGGCTACGAGCGTGTAAACCAAAAAATGATGCT 596
BSNT_00804___ 597 GCAAAGCGTGCTTCATGTCCTTTCAGACCGTGAAAAACAAATCATAGACC 646
..|.||.|||||||||||.||..||||.||.||||||.|.||.||..|||
BPUM_0446___s 597 TGAGAGTGTGCTTCATGTTCTGACAGATCGAGAAAAAGAGATTATCAACC 646
BSNT_00804___ 647 TTACGTATATACAAAACAAAAGCCAAAAAGAAACTGGGGACATTCTCGGT 696
|.||.|||.|||||||.||.||.||.||||||||.||.||..|..|.||.
BPUM_0446___s 647 TGACTTATTTACAAAATAAGAGTCAGAAAGAAACAGGCGATTTATTAGGG 696
BSNT_00804___ 697 ATATCTCAAATGCACGTCTCGCGCTTGCAACGCAAAGCTGTGAAGAAGCT 746
|||||.||||||||.||.|||.|..|||||||.||.||.||.||.|||||
BPUM_0446___s 697 ATATCCCAAATGCATGTATCGAGACTGCAACGGAAGGCAGTTAAAAAGCT 746
BSNT_00804___ 747 CAGAGAGGCCTTGAT-TGAAGATCCCTCGATGGAGTTAATGTAA 789
..||||.||.|| || .||||||.|.||.||||||.||..||||
BPUM_0446___s 747 ACGAGATGCATT-ATCAGAAGATGCGTCTATGGAGCTAGGGTAA 789
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