Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00801 and BPUM_0443
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence pep-align/BSNT_00801___rsbU.1.24716.seq
# -bsequence pep-align/BPUM_0443___rsbU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00801___rsbU-BPUM_0443___rsbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00801___rsbU-BPUM_0443___rsbU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: BPUM_0443___rsbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 265/335 (79.1%)
# Similarity: 306/335 (91.3%)
# Gaps: 0/335 ( 0.0%)
# Score: 1414.0
#
#
#=======================================
BSNT_00801___ 1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISI 50
|||:||:||||||||||||::||||||||||||||||||||||||||:|:
BPUM_0443___r 1 MDFKEVMEQRYHQLLSRYISDLTETSLYQAQKFSRKTIEHQIPPEEIVSV 50
BSNT_00801___ 51 HRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSE 100
||||::||||.||||||||||||||||||||:|||||.||||||||||||
BPUM_0443___r 51 HRKVIQELYPDLPEDVFHSLDFLIEVMIGYGLAYQEHLTLRGIQQEIKSE 100
BSNT_00801___ 101 IEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYYHFVKDKESINI 150
||||||||||||.||:|:.:..||||||||||||||||||||.|.::|||
BPUM_0443___r 101 IEIAANVQQTLLETKIPEGDTFDIGAISVPAKQMSGDYYHFVTDHDTINI 150
BSNT_00801___ 151 AIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDA 200
||||||||||||||||||||||||||||:|..|::|||.||||||||||.
BPUM_0443___r 151 AIADVIGKGIPAALCMSMIKYAMDSLPESGSGPTKVLKTLNRVVEQNVDP 200
BSNT_00801___ 201 SMFITMFYANYNMDNHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGI 250
||||||||.:||.:.|:|.||||||||||:|..|:|.||||:||||||||
BPUM_0443___r 201 SMFITMFYGSYNKETHEFKYASAGHEPGFFYCNKENQFYDLDAKGLVLGI 250
BSNT_00801___ 251 SQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMC 300
:.|:||||:::||:.|||::||||||||.::|:|||||.|::.||.|::.
BPUM_0443___r 251 APDFDYKQYEKHLDVGDMVILFSDGVTESKSEDGFLEREDIKALISENLS 300
BSNT_00801___ 301 SSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV 335
.||||||..|||||||||:|||||||||:||:|||
BPUM_0443___r 301 YSAQEMVDAIYDSLLKLQEFQLHDDFTLLVLKRKV 335
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