Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00798 and BPUM_0440

See DNA alignment / Visit BSNT_00798 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence pep-align/BSNT_00798___rsbR.1.24716.seq
#    -bsequence pep-align/BPUM_0440___rsbR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00798___rsbR-BPUM_0440___rsbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00798___rsbR-BPUM_0440___rsbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00798___rsbR
# 2: BPUM_0440___rsbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     197/277 (71.1%)
# Similarity:   222/277 (80.1%)
# Gaps:           4/277 ( 1.4%)
# Score: 950.5
# 
#
#=======================================

BSNT_00798___      1 MMSNQTVYQFIAENQNELLQLWTDTLKELSEQES-YQLTDQVYENISKEY     49
                      |||..|..|..::|.||.:.|||.||.|.|:|: ..|.|::||.|..||
BPUM_0440___r      1 -MSNHIVLAFARKHQKELEKEWTDILKRLGEKETDMMLNDKMYETICSEY     49

BSNT_00798___     50 IDILL--LSVKDENAAESQISELALRAVQIGLSMKFLATALAEFWKRLYT     97
                     :.:::  ||..|....|.::...||:.||:|:|:|.||..|.|....||.
BPUM_0440___r     50 VQLIITSLSEGDNEDFEEKVQNFALKIVQMGISLKLLANGLTEIRTHLYE     99

BSNT_00798___     98 KMNDKRLPDQESTELIWQIDRFFSPINTEIFNQYSISWEKTVSLQKIALQ    147
                     ||||.:...|||.:||||||||.:||:.||.|||||||||||||||||||
BPUM_0440___r    100 KMNDDKDTTQESHDLIWQIDRFITPIHNEILNQYSISWEKTVSLQKIALQ    149

BSNT_00798___    148 ELSAPLIPVFENITVMPLVGTIDTERAKRIMENLLNGVVKHRSQVVLIDI    197
                     |||||||||||:||||||||||||:|||:|||||||||||||||||||||
BPUM_0440___r    150 ELSAPLIPVFEHITVMPLVGTIDTDRAKKIMENLLNGVVKHRSQVVLIDI    199

BSNT_00798___    198 TGVPVVDTMVAHHIIQASEAVRLVGAKCLLAGIRPEIAQTIVNLGIDLSQ    247
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BPUM_0440___r    200 TGVPVVDTMVAHHIIQASEAVRLVGAKCLLVGIRPEIAQTIVNLGIDLSQ    249

BSNT_00798___    248 VITKNTLQKGIQTALEMTDRKIVSLGE    274
                     |.||||||||||||||||:||||||..
BPUM_0440___r    250 VTTKNTLQKGIQTALEMTNRKIVSLEG    276


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