Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00793 and BPUM_0436
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence pep-align/BSNT_00793___ydcC.1.24716.seq
# -bsequence pep-align/BPUM_0436___ydcC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00793___ydcC-BPUM_0436___ydcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00793___ydcC-BPUM_0436___ydcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BPUM_0436___ydcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 257/373 (68.9%)
# Similarity: 305/373 (81.8%)
# Gaps: 38/373 (10.2%)
# Score: 1357.0
#
#
#=======================================
BSNT_00793___ 1 MRLLWYASVLPKRVPSVPLKSNKRFLPFTSIEKKGLKKVRKSFVLLLTGL 50
:|||||||:||:
BPUM_0436___y 1 --------------------------------------MRKSFVLLVTGI 12
BSNT_00793___ 51 LAVLILSACGQKTQQDIVAGLDEKAKEYTSYKAKAKMTIETGSEPQVYNV 100
|.||||||||||:|:|||..|::||:|.||||||||||||||::||.|.|
BPUM_0436___y 13 LFVLILSACGQKSQKDIVGDLNKKAEEMTSYKAKAKMTIETGNDPQEYQV 62
BSNT_00793___ 101 EIWHKKPSLYRVYLENPKKDQNQVILRNENGVFVLTPSLNKSFRFQSDWP 150
|||:|||.|||||||||||||:||||||.||||||||||||||||.||||
BPUM_0436___y 63 EIWYKKPELYRVYLENPKKDQSQVILRNGNGVFVLTPSLNKSFRFHSDWP 112
BSNT_00793___ 151 NNSSQVYLFESLVKDVQNDSDAVFTAKEKKYVFETKTNYQHNKMLPTQEI 200
|||||||||||||||::|||.|.|.||:.|||||||||||||:|||||||
BPUM_0436___y 113 NNSSQVYLFESLVKDIKNDSAAQFKAKDSKYVFETKTNYQHNQMLPTQEI 162
BSNT_00793___ 201 TFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLS 250
||:||.|:|:||||:|:|:|.|||||||.|||||.|||::||||||||||
BPUM_0436___y 163 TFHKKTMAPASVKVLDSDKKPMVKVEFSHFEFNKSFDKDAFDEKKNMTLS 212
BSNT_00793___ 251 QMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTYGGEK 300
||||||||.|||:||||||:::|.|||.:|||::.|:.|||.:|||||:|
BPUM_0436___y 213 QMDVATSADPSDSFAVKTPVDMPEGVKKMEEKEMMTDAGKRYVMTYGGKK 262
BSNT_00793___ 301 SFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLL 350
|||||||||::|:||:.||:|||||:||.|:|.|:|.|||||.||||||:
BPUM_0436___y 263 SFTLIQEKARVAEASTPVTMNGEPVDLGMTVGVLTDQSLSWTSDGVDYLI 312
BSNT_00793___ 351 SSKDLSKEEMVTVAKSMQGQSSK 373
||.||||||::.||||::|||:|
BPUM_0436___y 313 SSSDLSKEELLMVAKSVEGQSAK 335
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