Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00792 and BPUM_0435

See DNA alignment / Visit BSNT_00792 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence pep-align/BSNT_00792___acpS.1.24716.seq
#    -bsequence pep-align/BPUM_0435___acpS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00792___acpS-BPUM_0435___acpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00792___acpS-BPUM_0435___acpS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00792___acpS
# 2: BPUM_0435___acpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      82/121 (67.8%)
# Similarity:    97/121 (80.2%)
# Gaps:           0/121 ( 0.0%)
# Score: 404.0
# 
#
#=======================================

BSNT_00792___      1 MIYGIGLDITELKRIASMAGRQKRFAERILTRSELDQYYELSEKRKIEFL     50
                     ||.||||||.|:.|:|.:..||.|..|||||.:|.|.::.|||||::|||
BPUM_0435___a      1 MIKGIGLDIVEINRLAHVLSRQPRLPERILTLNEQDIFHALSEKRQLEFL     50

BSNT_00792___     51 AGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNSKPYIICTKLSQAAVH    100
                     ||||||||||:||:||||||.|||.||||:||::.||:|...|.....||
BPUM_0435___a     51 AGRFAAKEAFAKAYGTGIGRHLSFHDIEIQKDEHGKPFIKSEKTKDDQVH    100

BSNT_00792___    101 VSITHTKEYAAAQVVIERLSS    121
                     ||||||||||||||:||||||
BPUM_0435___a    101 VSITHTKEYAAAQVLIERLSS    121


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.