Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00792 and BPUM_0435
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00792___acpS.1.24716.seq
# -bsequence dna-align/BPUM_0435___acpS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00792___acpS-BPUM_0435___acpS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00792___acpS-BPUM_0435___acpS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00792___acpS
# 2: BPUM_0435___acpS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 261/393 (66.4%)
# Similarity: 261/393 (66.4%)
# Gaps: 54/393 (13.7%)
# Score: 795.0
#
#
#=======================================
BSNT_00792___ 1 ATGATTTACGGCATTGGGCTGGACAT--TACCGAGCTTAAACGCATCGC- 47
|||||..|.||.||.||.||.||.|| || |||.|.||.||..||||
BPUM_0435___a 1 ATGATCAAAGGAATAGGTCTTGATATAGTA--GAGATCAACCGGCTCGCA 48
BSNT_00792___ 48 CTCTATG-GCTGGGCGCCAGAAAA---GGTTTGCC-GAGCGGATTTTGAC 92
| ||| |||..| .|||.|| .||||||| ||.||.|||||.||
BPUM_0435___a 49 C---ATGTGCTTAG---TAGACAACCTCGTTTGCCAGAACGAATTTTAAC 92
BSNT_00792___ 93 GCGAAGCGAGCTTGACCAATACTATGAGCTTTC--------AGAGAAAAG 134
|..|| .|||.|||.|| |.||||| ||.||||||
BPUM_0435___a 93 GTTAA------ATGAACAAGAC----ATCTTTCACGCACTTAGTGAAAAG 132
BSNT_00792___ 135 A--AAAATCGAATTTCTCGCGGGCAGATTCGCGGCAAAAGAAGCTTTCTC 182
| .|..|.||||||.|.||.||..|.||.||.|||||.|||||||||.|
BPUM_0435___a 133 AGGCAGCTGGAATTTTTGGCAGGACGTTTTGCAGCAAAGGAAGCTTTCGC 182
BSNT_00792___ 183 GAAAGCGTTTGGCACCGGCATTGGGAGGCAGCTCAGCTTTCAGGACATTG 232
.|||||.|..||.||.||.|||||.|||||..|.||||||||.|||||.|
BPUM_0435___a 183 CAAAGCATACGGAACGGGAATTGGAAGGCATTTAAGCTTTCATGACATAG 232
BSNT_00792___ 233 AAATTAGGAAAGACCAAAATAGCAAGCCCTATATCATTTGCA----CGAA 278
||||...|||||||.||.||.|.||.|| |.|||| || ||||
BPUM_0435___a 233 AAATCCAGAAAGACGAACATGGAAAACC---TTTCAT---CAAAAGCGAA 276
BSNT_00792___ 279 ACTGAGCC--AGGCCGCC---GTTCACGTATCGATCACTCATACAAAAGA 323
| ||.| |||.||.| |||||.||.||.||||||||.||.|||||
BPUM_0435___a 277 A---AGACGAAGGACGACCAAGTTCATGTGTCCATCACTCACACGAAAGA 323
BSNT_00792___ 324 ATACGCTGCCGCGCAGGTTGTGATTGAAAGGTTGTCAAGCTAG 366
|||.|||||.||.||.|||.|.|||||||||||||||||||||
BPUM_0435___a 324 ATATGCTGCGGCACAAGTTTTAATTGAAAGGTTGTCAAGCTAG 366
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