Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00791 and BPUM_0434
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence pep-align/BSNT_00791___ydcA.1.24716.seq
# -bsequence pep-align/BPUM_0434___ydcA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00791___ydcA-BPUM_0434___ydcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00791___ydcA-BPUM_0434___ydcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00791___ydcA
# 2: BPUM_0434___ydcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 127/201 (63.2%)
# Similarity: 160/201 (79.6%)
# Gaps: 2/201 ( 1.0%)
# Score: 680.5
#
#
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BSNT_00791___ 1 MFIRTENFQTFIRLYPVVTFILALQAVLWLFFSLPAHSVVLWRDTVTGYN 50
||||||:||.|||.||:||.|||||..|||.|:||...:.|..|.:.|:|
BPUM_0434___y 1 MFIRTESFQQFIRSYPIVTTILALQFGLWLLFALPIPLIQLGHDHLVGFN 50
BSNT_00791___ 51 LGVANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKAHFLLV 100
.|||.|||||||||:.||...||:||||||:||||||||.:|||..||::
BPUM_0434___y 51 YGVAAGEWWRLITPVFLHGSLTHILFNSMSLFLFAPALEHLLGKVRFLII 100
BSNT_00791___ 101 YAGSGIIGNIGTYVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQE 150
|.|:|.|||:|||..|||:||||||||||||||||||::|||:..::.:.
BPUM_0434___y 101 YLGAGFIGNLGTYWVEPLEYVHVGASGAIFGLFGVYLYLVLFKPHMMDRG 150
BSNT_00791___ 151 HSKMIITLLAFAVLMSFINSNINMMAHLFGLCGGFLLS--FLCVQKKERR 198
:|::|:|:||.:|:|:|:|||||:|||||||.||.||: .|....|:||
BPUM_0434___y 151 NSQVILTILAVSVIMTFVNSNINIMAHLFGLIGGMLLAPLTLVFHSKKRR 200
BSNT_00791___ 199 Y 199
|
BPUM_0434___y 201 Y 201
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