Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00788 and BPUM_0432

See DNA alignment / Visit BSNT_00788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence pep-align/BSNT_00788___ydbS.1.24716.seq
#    -bsequence pep-align/BPUM_0432___ydbS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00788___ydbS-BPUM_0432___ydbS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00788___ydbS-BPUM_0432___ydbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00788___ydbS
# 2: BPUM_0432___ydbS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     109/159 (68.6%)
# Similarity:   133/159 (83.6%)
# Gaps:           0/159 ( 0.0%)
# Score: 583.0
# 
#
#=======================================

BSNT_00788___      1 MREQPKNQISPDGLKVWRLQEIIISAVCLLIVIAVAVLSYYFHWPYWISG     50
                     ||:||:.|||.:||||||||..|||.:.|||:|.|.|.|||.||||||..
BPUM_0432___y      1 MRKQPQRQISLNGLKVWRLQNGIISLIFLLIIIGVFVASYYLHWPYWIGA     50

BSNT_00788___     51 VLGAVWLLGSIVTVFIIPKVRHKVWRYEVHEHEIDIQSGIFVVTRVIVPM    100
                     :|..:|:|..:..:::|||:||::|||||.|:||:||.|:..||||||||
BPUM_0432___y     51 ILTGLWVLQVVFGIWLIPKIRHRIWRYEVFENEIEIQHGLIRVTRVIVPM    100

BSNT_00788___    101 VRVQHVDTSQGPLLKKYNLATVKISTAATVHSIPALEMEEADRLRDSISR    150
                     ||||||||||||||::|.||:|:||||||||.|||||:||||.|||.|||
BPUM_0432___y    101 VRVQHVDTSQGPLLRRYRLASVQISTAATVHDIPALELEEADELRDYISR    150

BSNT_00788___    151 LARVTDDDV    159
                     |||||:|||
BPUM_0432___y    151 LARVTEDDV    159


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