Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00788 and BPUM_0432
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence dna-align/BSNT_00788___ydbS.1.24716.seq
# -bsequence dna-align/BPUM_0432___ydbS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00788___ydbS-BPUM_0432___ydbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00788___ydbS-BPUM_0432___ydbS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00788___ydbS
# 2: BPUM_0432___ydbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity: 338/519 (65.1%)
# Similarity: 338/519 (65.1%)
# Gaps: 78/519 (15.0%)
# Score: 1039.5
#
#
#=======================================
BSNT_00788___ 1 TTGAGAGAGCAGCCAAAAAACCAAATCAGTCCAGACGGATTAAAGGTTTG 50
.|||||.|.|||||..||...|||||.|||..|.|.||.||||||||.||
BPUM_0432___y 1 GTGAGAAAACAGCCGCAACGTCAAATTAGTTTAAATGGTTTAAAGGTATG 50
BSNT_00788___ 51 GCGACTTCAA----GAGATCATCATATCCGCTG-TTTGCTTGCTTATTGT 95
|||.|||||| || ||||||..|| || |||.|||.||.||..|
BPUM_0432___y 51 GCGCCTTCAAAATGGA-ATCATCTCAT----TGATTTTCTTACTCATCAT 95
BSNT_00788___ 96 CATTGCAG--TTGCAGTGTT--AAGCTATTATTTTCATTGGCCGTACTGG 141
|||||..| || |||| .||.||||||.|||||||||||||.|||
BPUM_0432___y 96 CATTGGGGTATT----TGTTGCTAGTTATTATCTTCATTGGCCGTATTGG 141
BSNT_00788___ 142 ATCAGCGGCGTGCTCGGCGCAGTTTGGCTGCTGGGATC-----GATTGTG 186
||..|.|.|.|.|||..|| |||| .|||| || |.||
BPUM_0432___y 142 ATTGGTGCCATCCTCACCG--GTTT-----ATGGG-TCTTACAGGTT--- 180
BSNT_00788___ 187 ACGGTCTTTATCATT---------CCGAAGGTCCGTCATAAGGTGTGGCG 227
||.|||..|||| |||||..||||||||....|.|||||
BPUM_0432___y 181 ---GTTTTTGGCATTTGGCTTATACCGAAAATCCGTCATCGCATCTGGCG 227
BSNT_00788___ 228 ATATGAAGTCCAT--GAACATGAAATAGATATTCAG-------TCAGGTA 268
.||.||||| || |||.|||||||.||.|||||| |||
BPUM_0432___y 228 TTACGAAGT--ATTCGAAAATGAAATCGAAATTCAGCATGGGCTCA---- 271
BSNT_00788___ 269 TTTTTGTGGTGACACGTGTGATTGTTCCGATGGTCAGAGTTCAGCACGTC 318
||.|| ||.||||||||||||||.||||||||..|.||.|||||.|||
BPUM_0432___y 272 --TTCGT-GTCACACGTGTGATTGTACCGATGGTGCGTGTCCAGCATGTC 318
BSNT_00788___ 319 GATACGTCACAAGGGCCATTATTAAAAAAATA----CAACC---TGGCAA 361
|||||.||||||||||||.|.||| | |.||| ||||..
BPUM_0432___y 319 GATACATCACAAGGGCCACTCTTA-------AGGCGCTACCGTTTGGCTT 361
BSNT_00788___ 362 CGGTGAAAATTTCCACGGCCGCGACCGTTCATTCGATCCCCGCTTTAGAG 411
|.||..||||.||.||.||.||.||.||||||...||.||.||..||||.
BPUM_0432___y 362 CTGTTCAAATATCGACTGCTGCCACAGTTCATGATATACCGGCGCTAGAA 411
BSNT_00788___ 412 ATGGAGGAAGCGGATCGGCTGAGAGACTCCATTTCCCGTCTGGCGAGGGT 461
.|.||.|||||.|||..|||..|.||.|.|||.||.|||.|.||.|||||
BPUM_0432___y 412 TTAGAAGAAGCAGATGAGCTTCGTGATTACATATCTCGTTTAGCAAGGGT 461
BSNT_00788___ 462 GACTGACGATGATGTCTGA 480
|||.||.||||||||||||
BPUM_0432___y 462 GACGGAAGATGATGTCTGA 480
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