Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00786 and BPUM_0431
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence pep-align/BSNT_00786___ydbR.1.24716.seq
# -bsequence pep-align/BPUM_0431___ydbR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00786___ydbR-BPUM_0431___ydbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00786___ydbR-BPUM_0431___ydbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00786___ydbR
# 2: BPUM_0431___ydbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity: 449/517 (86.8%)
# Similarity: 470/517 (90.9%)
# Gaps: 27/517 ( 5.2%)
# Score: 2224.0
#
#
#=======================================
BSNT_00786___ 1 -----------------MTITFQDFNLSSDLMKAINRMGFEEATPIQAQT 33
:|||||||.||..||||||||||||||||||:|
BPUM_0431___y 1 MIIHEITETAIRRSLNNLTITFQDFQLSESLMKAINRMGFEEATPIQAET 50
BSNT_00786___ 34 IPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTREL 83
|||||.||||||||||||||||||||||||||:|.|||||||:|||||||
BPUM_0431___y 51 IPLGLQNKDVIGQAQTGTGKTAAFGIPLVEKIDPASPNIQAIIIAPTREL 100
BSNT_00786___ 84 AIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLL 133
|||||||||||||||||:|||||||||||||||:|||||:||||||||||
BPUM_0431___y 101 AIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRSLKKNPHIIVGTPGRLL 150
BSNT_00786___ 134 DHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
|||||||:||.||.|||:||||||||||||:|||||||||||||||||||
BPUM_0431___y 151 DHINRRTMRLQNVETVVLDEADEMLNMGFIEDIESILSNVPSEHQTLLFS 200
BSNT_00786___ 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLT 233
||||||||||||||||.|||||||||||||||||||||::.|||||||||
BPUM_0431___y 201 ATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLDIHERKKFDTLT 250
BSNT_00786___ 234 RLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA 283
||||||||||:|||||||||||||.||||||||.||||||||||||||||
BPUM_0431___y 251 RLLDIQSPELSIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVA 300
BSNT_00786___ 284 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG 333
|||||||:|:||||||||||||||||||||||||||||||||||||||||
BPUM_0431___y 301 LRKFKEGSIDVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTG 350
BSNT_00786___ 334 RAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVT 383
|||:|||||||||||||.||||||||||||||||||||||||:|||||||
BPUM_0431___y 351 RAGRTGMAMTFITPREKDMLRAIEQTTKRKMDRMKEPTLDEAIEGQQQVT 400
BSNT_00786___ 384 VERLRTTISENNLNFYMTAAAELLEDHDAVTVVAAAIKMATKEPDDTPVR 433
|:||||.|||||||||||||||||||||:||||||||||.|||||.||||
BPUM_0431___y 401 VDRLRTIISENNLNFYMTAAAELLEDHDSVTVVAAAIKMMTKEPDATPVR 450
BSNT_00786___ 434 LTDEAPMVSKRYKNQR-SSKRRDGQGGGYRGGKGKSNNRSSY-DKKR-SN 480
|||||||||||.:|.| |||||||.||| |.:||| |||| |||| ||
BPUM_0431___y 451 LTDEAPMVSKRNRNNRSSSKRRDGGGGG--GYRGKS--RSSYGDKKRSSN 496
BSNT_00786___ 481 DR-RSSGDRRQKKSY-- 494
|| |||.||||||||
BPUM_0431___y 497 DRNRSSSDRRQKKSYNN 513
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