Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00768 and BPUM_0420

See DNA alignment / Visit BSNT_00768 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_00768___ydbI.1.24716.seq
#    -bsequence pep-align/BPUM_0420___ydbI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00768___ydbI-BPUM_0420___ydbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00768___ydbI-BPUM_0420___ydbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00768___ydbI
# 2: BPUM_0420___ydbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity:     251/350 (71.7%)
# Similarity:   289/350 (82.6%)
# Gaps:          10/350 ( 2.9%)
# Score: 1281.0
# 
#
#=======================================

BSNT_00768___      1 MAALVKFFQHPGVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLE     50
                     |||.:|.|:.|||:|||:||||...|||.:.|:|||||||||||||:|||
BPUM_0420___y      1 MAAFLKLFEKPGVKRFSVFVVLATALYLLRGMMNLILLTFIFTFLMNRLE     50

BSNT_00768___     51 LVVRQFVSRFFRVSQRVVITFLYILLAVLLTVGGFVFYPVVAAQIQQLVK    100
                     .|:|.|:|||.::.|:.|||.||||||..||.|||||.|::|.|::||..
BPUM_0420___y     51 EVIRGFLSRFLKIGQKSVITILYILLAGGLTFGGFVFVPIIAKQVEQLFH    100

BSNT_00768___    101 QIKHIAYHPDSIPFFDEITSVFGDINISSYVKEGFNVVYTYLADISTFGL    150
                     ..|.||.||.::||||.||:||||..||:|.::|||.:||||.|.|||.:
BPUM_0420___y    101 LGKKIADHPQNLPFFDVITNVFGDFKISAYFEKGFNFLYTYLTDFSTFSI    150

BSNT_00768___    151 QVVMALILSMFFLFEKKRLSEFMAKFKTSKLRVFYEEIAFFGSKFARTFG    200
                     ||:|:|||||||||||:||.:||.||||||:.|||.||||||.||:||||
BPUM_0420___y    151 QVIMSLILSMFFLFEKERLIQFMNKFKTSKISVFYHEIAFFGRKFSRTFG    200

BSNT_00768___    201 KVLEAQFIIALVNCILTFIALWIMHFPQLFGLSIMVFFLGLIPVAGVVIS    250
                     ||||||||||.|||:||.|||.||.|||||||::|||.||||||||||||
BPUM_0420___y    201 KVLEAQFIIATVNCVLTTIALGIMGFPQLFGLAVMVFLLGLIPVAGVVIS    250

BSNT_00768___    251 LIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKTELPIFF    300
                     |||||||||:.|||||||||||||..|||||.||||||||||||||||||
BPUM_0420___y    251 LIPLSIIAYTLGGGMYVLYIVLVIVIIHAIEAYFLNPKLMSAKTELPIFF    300

BSNT_00768___    301 TFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGPRENSDKK    350
                     ||.|||||||:.||||||||||||||:||||:|||||:.|          
BPUM_0420___y    301 TFIVLIFSEHYIGIWGLIIGIPIFVFILDILEVTNKEESS----------    340


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.